Parental gene: | EIF3L, ENSPTRG00000014352 |
| Aliases: | EIF3L, EIF3EIP, EIF3S6IP |
| Description: | Pan troglodytes eukaryotic translation initiation factor 3, subunit L (EIF3L), mRNA. [Source:RefSeq mRNA;Acc:NM_001135207] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 22:36499937..36527936(+) |
>ENSPTRG00000014352
ATGTCTTATCCCGCTGATGATTATGAGTCTGAGGCGGCTTATGACCCCTACGCTTATCCCAGCGACTATGATATGCACAC
AGGAGATCCAAAGCAGGACCTTGCTTATGAACGTCAGTATGAACAGCAAACCTATCAGGTGATCCCTGAGGTGATCAAAA
ACTTCATCCAGTATTTCCACAAAACTGTCTCAGATTTGATTGACCAGAAAGTCTATGAGCTACAGGCCAGTCGTGTCTCC
AGTGATGTCATTGACCAGAAGGTGTATGAGATCCAGGACATCTATGAGAACAGCTGGACCAAGCTGACTGAAAGATTCTT
CAAGAATACACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCTTGATTTTATACAAAG
AATTATACTACAGGCACATATATGCCAAAGTCAGTGGGGGACCTTCCTTGGAGCAGAGGTTTGAATCTTATTACAACTAC
TGCAATCTCTTCAACTACATTCTTAATGCCGATGGTCCTGCTCCCCTTGAACTACCCAACCAGTGGCTCTGGGATATCAT
CGATGAGTTCATCTACCAGTTTCAGTCATTCAGTCAGTACCGCTGTAAGACTGCCAAGAAGTCAGAGGAGGAGATTGACT
TTCTTCGTTCCAATCCCAAAATCTGGAATGTTCATAGTGTCCTCAATGTCCTTCATTCCCTGGTAGACAAATCCAACATC
AACCGACAGTTGGAGGTATACACAAGCGGAGGTGACCCCGAGAGTGTGGCTGGGGAGTATGGGCGGCACTCCCTCTACAA
AATGCTTGGTTACTTCAGCCTGGTCGGGCTTCTCCGCCTGCACTCCCTGTTAGGAGATTACTACCAGGCCATCAAGGTGC
TGGAGAACATCGAACTGAACAAGAAGAGTATGTATTCCCGTGTGCCAGAGTGCCAGGTCACCACATACTATTATGTTGGG
TTTGCATATTTGATGATGCGTCGTTACCAGGATGCCATCCGGGTCTTCGCCAACATCCTCCTCTACATCCAGAGGACCAA
GAGCATGTTCCAGAGGACCACGTACAAGTATGAGATGGTA
ATGTCTTATCCCGCTGATGATTATGAGTCTGAGGCGGCTTATGACCCCTACGCTTATCCCAGCGACTATGATATGCACAC
AGGAGATCCAAAGCAGGACCTTGCTTATGAACGTCAGTATGAACAGCAAACCTATCAGGTGATCCCTGAGGTGATCAAAA
ACTTCATCCAGTATTTCCACAAAACTGTCTCAGATTTGATTGACCAGAAAGTCTATGAGCTACAGGCCAGTCGTGTCTCC
AGTGATGTCATTGACCAGAAGGTGTATGAGATCCAGGACATCTATGAGAACAGCTGGACCAAGCTGACTGAAAGATTCTT
CAAGAATACACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGGCAATGATGCTGTCTTCTTGATTTTATACAAAG
AATTATACTACAGGCACATATATGCCAAAGTCAGTGGGGGACCTTCCTTGGAGCAGAGGTTTGAATCTTATTACAACTAC
TGCAATCTCTTCAACTACATTCTTAATGCCGATGGTCCTGCTCCCCTTGAACTACCCAACCAGTGGCTCTGGGATATCAT
CGATGAGTTCATCTACCAGTTTCAGTCATTCAGTCAGTACCGCTGTAAGACTGCCAAGAAGTCAGAGGAGGAGATTGACT
TTCTTCGTTCCAATCCCAAAATCTGGAATGTTCATAGTGTCCTCAATGTCCTTCATTCCCTGGTAGACAAATCCAACATC
AACCGACAGTTGGAGGTATACACAAGCGGAGGTGACCCCGAGAGTGTGGCTGGGGAGTATGGGCGGCACTCCCTCTACAA
AATGCTTGGTTACTTCAGCCTGGTCGGGCTTCTCCGCCTGCACTCCCTGTTAGGAGATTACTACCAGGCCATCAAGGTGC
TGGAGAACATCGAACTGAACAAGAAGAGTATGTATTCCCGTGTGCCAGAGTGCCAGGTCACCACATACTATTATGTTGGG
TTTGCATATTTGATGATGCGTCGTTACCAGGATGCCATCCGGGTCTTCGCCAACATCCTCCTCTACATCCAGAGGACCAA
GAGCATGTTCCAGAGGACCACGTACAAGTATGAGATGGTA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 41 .68 RPM |
| SRP007412_cerebellum | 94 .35 RPM |
| SRP007412_heart | 53 .40 RPM |
| SRP007412_kidney | 102 .85 RPM |
| SRP007412_liver | 45 .04 RPM |
| SRP007412_testis | 35 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012225 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000019068 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000029444 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_940 | 82.50 | 76.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000014352 retrocopies