Parental gene:

IMPDH2, ENSPTRG00000014908

Aliases:None
Description:Inosine-5'-monophosphate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:H2R178]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:3:49789214..49794326(-)


>ENSPTRG00000014908
ATGGCCGACTACCTGATTAGTGGGGGCACGTCCTACGTGCCAGACGACGGACTCACAGCACAGCAGCTCTTCAACTGCGG
AGACGGCCTCACCTACAATGACTTTCTCATTCTCCCTGGGTACATCGACTTCACTGCAGACCAGGTGGACCTGACTTCTG
CTCTGACCAAGAAAATCACTCTTAAGACCCCACTGGTTTCCTCTCCCATGGACACAGTCACAGAGGCTGGGATGGCCATA
GCAATGGCGCTTACAGGCGGTATTGGCTTCATCCACCACAACTGTACACCTGAATTCCAGGCCAATGAAGTTCGGAAAGT
GAAGAAATATGAACAGGGATTCATCACAGACCCTGTGGTCCTCAGCCCCAAGGATCGCGTGCGGGATGTTTTTGAGGCCA
AGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGTGGGCATCATCTCCTCC
AGGGACATTGATTTTCTCAAAGAGGAGGAACATGACTGTTTCTTGGAAGAGATAATGACAAAGAGGGAAGACTTGGTGGT
AGCCCCTGCAGGCATCACACTGAAGGAGGCAAATGAAATTCTGCAGCGCAGCAAGAAGGGAAAGTTGCCCATTGTAAATG
AAGATGATGAGCTTGTGGCCATCATTGCCCGGACAGACCTGAAGAAGAATCGGGACTACCCACTAGCCTCCAAAGATGCC
AAGAAACAGCTGCTGTGTGGGGCAGCCATTGGCACTCATGAGGATGACAAGTATAGGCTGGACTTGCTCGCCCAGGCTGG
TGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGACAAAT
ACCCTAATCTCCAAGTCATTGGAGGCAATGTGGTCACTGCTGCCCAGGCCAAGAACCTCATTGATGCAGGTGTGGATGCC
CTTCGGGTGGGCATGGGAAGTGGCTCCATCTGCATTACGCAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGT
GTACAAGGTGTCAGAGTATGCACGGCGCTTTGGTGTTCCGGTCATTGCTGATGGAGGAATCCAAAATGTGGGTCATATTG
CGAAAGCCTTGGCCCTTGGGGCCTCCACAGTCATGATGGGCTCTCTCCTGGCTGCCACCACTGAGGCCCCTGGTGAATAC
TTCTTTTCCGATGGGATCCGGCTAAAGAAATATCGCGGTATGGGTTCTCTCGATGCCATGGACAAGCACCTCAGCAGCCA
GAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCTGGTGCTGTGCAGGACAAAGGGTCAATCC
ACAAATTTGTCCCTTACCTGATTGCTGGCATCCAACACTCATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGA
GCCATGATGTACTCTGGGGAGCTTAAGTTTGAGAAGAGAACGTCCTCAGCCCAGGTGGAAGGTGGCGTCCATAGCCTCCA
TTCGTATGAGAAGCGGCTTTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 40 .50 RPM
SRP007412_cerebellum 53 .74 RPM
SRP007412_heart 30 .69 RPM
SRP007412_kidney 65 .75 RPM
SRP007412_liver 36 .11 RPM
SRP007412_testis 15 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000009844 ortholog_one2one 1 retrogene
retro_fcat_1377,
Homo sapiens ENSG00000178035 ortholog_one2one 1 retrogene
retro_hsap_697,
Gorilla gorilla ENSGGOG00000013245 ortholog_one2one 1 retrogene
retro_ggor_594,
Mus musculus ENSMUSG00000062867 ortholog_one2one 1 retrogene
retro_mmus_3158,
Nomascus leucogenys ENSNLEG00000006743 ortholog_one2one 7 retrogenes
retro_nleu_1126, retro_nleu_1371, retro_nleu_1378, retro_nleu_1591, retro_nleu_2183, retro_nleu_2188, retro_nleu_359,
Pongo abelii ENSPPYG00000013884 ortholog_one2one 1 retrogene
retro_pabe_528,
Pan troglodytes ENSPTRG00000019660 within_species_paralog 7 retrogenes
retro_ptro_1087, retro_ptro_1724, retro_ptro_1758, retro_ptro_2575, retro_ptro_2719, retro_ptro_2886, retro_ptro_3198,
Rattus norvegicus ENSRNOG00000031965 ortholog_one2one 1 retrogene
retro_rnor_1523,
Tursiops truncatus ENSTTRG00000017349 ortholog_one2one 2 retrogenes
retro_ttru_1148, retro_ttru_1665,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_501 74.28 86.96
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000014908 retrocopies