Parental gene: | NMD3, ENSPTRG00000015586 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 3:165005506..165036226(+) |
>ENSPTRG00000015586
ATGGAGTATATGGCAGAATCCACCGACCGCAGCCCTGGACACATCTTGTGCTGTGAGTGTGGTGTTCCGATAAGTTCAAA
TCCTGCCAATATTTGTGTGGCCTGTTTGCGAAGTAAAGTGGACATCAGCCAAGGTATTCCGAAACAAGTCTCGATTTCGT
TCTGCAAACAATGTCAAAGGTATTTTCAACCACCAGGAACTTGGATACAGTGTGCTTTAGAATCCAGGGAACTTCTTGCT
TTGTGCTTGAAAAAAATCAAAGCCCCTCTGAGTAAGGTACGGCTTGTAGATGCAGGCTTTGTTTGGACTGAGCCTCATTC
TAAGAGACTTAAAGTTAAACTGACTATTCAGAAAGAGGTGATGAATGGTGCTATCCTTCAACAAGTGTTTGTGGTGGATT
ATGTTGTTCAGTCCCAAATGTGTGGAGATTGCCATAGAGTAGAAGCTAAGGATTTCTGGAAGGCTGTGATTCAAGTGAGG
CAAAAGACTTTGCATAAAAAAACTTTCTACTATCTGGAACAGTTAATTCTGAAATATGGAATGCATCAGAATACACTTCG
TATCAAAGAGATTCATGATGGTCTGGATTTTTATTATTCCTCAAAACAACATGCTCAGAAGATGGTCGAATTTCTTCAGT
GTACAGTTCCCTGTAGATACAAAGCATCACAAAGACTGATCTCTCAAGATATCCATAGTAACACATACAATTACAAAAGC
ACTTTTTCTGTGGAAATTGTTCCAATATGCAAGGATAATGTTGTCTGTCTGTCTCCAAAACTGGCACAAAGCCTGGGAAA
TATGAACCAGATTTGTGTGTGTATTCGAGTAACCAGTGCCATTCACCTCATTGATCCAAACACCCTACAAGTGGCAGATA
TTGATGGGAGCACTTTCTGGAGTCACCCTTTCAATAGTTTATGTCATCCCAAACAGCTAGAGGAGTTTATTGTGATGGAA
TGCAGCATAGTCCGAGATATAAAACGTGCTGCAGGTGCTGGAATGATATCAAAAAAGCATACCCTCGGGGAAGTCTGGGT
ACAGAAGACATCTGAAATGAATACAGATAAACAGTATTTTTGTCGTACTCATTTGGGACATCTTCTAAATCCCGGAGACC
TGGTGTTAGGGTTTGATTTGGCCAACTGTAACTTAAATGATGAGCATGTCAACAAAATGAACTCAGATAGAGTTCCAGAT
GTGGTATTAATCAAGAAGAGCTATGACCGGACCAAACGTCAGCGTCGTAGAAACTGGAAATTGAAAGAGCTTGCAAGAGA
GAGAGAAAATATGGATACAGATGATGAAAGGCAATACCAAGATTTTCTTGAAGATCTTGAAGAAGATGAGGCAATTAGAA
AAAATGTCAACATTTACAGAGATTCAGCCATCCCTGTGGAAAGTGACACCGATGATGAAGGAGCACCTCGAATTAGTCTG
GCTGAGATGCTTGAAGACCTTCATATTTCCCAAGATGCCACTGGTGAAGAAGGTGCATCAATGCTGACATAA
ATGGAGTATATGGCAGAATCCACCGACCGCAGCCCTGGACACATCTTGTGCTGTGAGTGTGGTGTTCCGATAAGTTCAAA
TCCTGCCAATATTTGTGTGGCCTGTTTGCGAAGTAAAGTGGACATCAGCCAAGGTATTCCGAAACAAGTCTCGATTTCGT
TCTGCAAACAATGTCAAAGGTATTTTCAACCACCAGGAACTTGGATACAGTGTGCTTTAGAATCCAGGGAACTTCTTGCT
TTGTGCTTGAAAAAAATCAAAGCCCCTCTGAGTAAGGTACGGCTTGTAGATGCAGGCTTTGTTTGGACTGAGCCTCATTC
TAAGAGACTTAAAGTTAAACTGACTATTCAGAAAGAGGTGATGAATGGTGCTATCCTTCAACAAGTGTTTGTGGTGGATT
ATGTTGTTCAGTCCCAAATGTGTGGAGATTGCCATAGAGTAGAAGCTAAGGATTTCTGGAAGGCTGTGATTCAAGTGAGG
CAAAAGACTTTGCATAAAAAAACTTTCTACTATCTGGAACAGTTAATTCTGAAATATGGAATGCATCAGAATACACTTCG
TATCAAAGAGATTCATGATGGTCTGGATTTTTATTATTCCTCAAAACAACATGCTCAGAAGATGGTCGAATTTCTTCAGT
GTACAGTTCCCTGTAGATACAAAGCATCACAAAGACTGATCTCTCAAGATATCCATAGTAACACATACAATTACAAAAGC
ACTTTTTCTGTGGAAATTGTTCCAATATGCAAGGATAATGTTGTCTGTCTGTCTCCAAAACTGGCACAAAGCCTGGGAAA
TATGAACCAGATTTGTGTGTGTATTCGAGTAACCAGTGCCATTCACCTCATTGATCCAAACACCCTACAAGTGGCAGATA
TTGATGGGAGCACTTTCTGGAGTCACCCTTTCAATAGTTTATGTCATCCCAAACAGCTAGAGGAGTTTATTGTGATGGAA
TGCAGCATAGTCCGAGATATAAAACGTGCTGCAGGTGCTGGAATGATATCAAAAAAGCATACCCTCGGGGAAGTCTGGGT
ACAGAAGACATCTGAAATGAATACAGATAAACAGTATTTTTGTCGTACTCATTTGGGACATCTTCTAAATCCCGGAGACC
TGGTGTTAGGGTTTGATTTGGCCAACTGTAACTTAAATGATGAGCATGTCAACAAAATGAACTCAGATAGAGTTCCAGAT
GTGGTATTAATCAAGAAGAGCTATGACCGGACCAAACGTCAGCGTCGTAGAAACTGGAAATTGAAAGAGCTTGCAAGAGA
GAGAGAAAATATGGATACAGATGATGAAAGGCAATACCAAGATTTTCTTGAAGATCTTGAAGAAGATGAGGCAATTAGAA
AAAATGTCAACATTTACAGAGATTCAGCCATCCCTGTGGAAAGTGACACCGATGATGAAGGAGCACCTCGAATTAGTCTG
GCTGAGATGCTTGAAGACCTTCATATTTCCCAAGATGCCACTGGTGAAGAAGGTGCATCAATGCTGACATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 13 .03 RPM |
| SRP007412_cerebellum | 25 .06 RPM |
| SRP007412_heart | 31 .33 RPM |
| SRP007412_kidney | 25 .03 RPM |
| SRP007412_liver | 23 .34 RPM |
| SRP007412_testis | 21 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000169251 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000012938 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2627 | 85.47 | 67.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000015586 retrocopies