Parental gene: | PLAC8, ENSPTRG00000016226 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 4:46894927..46921156(+) |
>ENSPTRG00000016226
ATGCAAGCTCAGGCGCCGGTGGTCGTTGTGACCCAACCTGGAGTCGGTCCCGGTCCGGCCCCCCAGAACTCCAACTGGCA
GACAGGCATGTGTGACTGTTTCAGCGACTGCGGAGTCTGTCTCTGTGGCACATTTTGTTTCCCGTGCCTTGGGTGTCAAG
TTGCAGCTGATATGAATGAATGCTGTCTGTGTGGAACAAGCGTCGCAATGAGGACTCTCTACAGGACCCGATATGGCATC
CCTGGATCTATTTGTGATGACTATATGGCAACTCTTTGCTGTCCTCATTGTACTCTTTGCCAAATCAAGAGAGATATCAA
CAGAAGGAGAGCCATGCGTACTTTCTAA
ATGCAAGCTCAGGCGCCGGTGGTCGTTGTGACCCAACCTGGAGTCGGTCCCGGTCCGGCCCCCCAGAACTCCAACTGGCA
GACAGGCATGTGTGACTGTTTCAGCGACTGCGGAGTCTGTCTCTGTGGCACATTTTGTTTCCCGTGCCTTGGGTGTCAAG
TTGCAGCTGATATGAATGAATGCTGTCTGTGTGGAACAAGCGTCGCAATGAGGACTCTCTACAGGACCCGATATGGCATC
CCTGGATCTATTTGTGATGACTATATGGCAACTCTTTGCTGTCCTCATTGTACTCTTTGCCAAATCAAGAGAGATATCAA
CAGAAGGAGAGCCATGCGTACTTTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 1 .09 RPM |
| SRP007412_cerebellum | 2 .58 RPM |
| SRP007412_heart | 1 .43 RPM |
| SRP007412_kidney | 2 .80 RPM |
| SRP007412_liver | 12 .18 RPM |
| SRP007412_testis | 0 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000145287 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007464 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000019309 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000029322 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000017232 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000002217 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_800 | 79.63 | 93.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000016226 retrocopies