Parental gene:

POLR3D, ENSPTRG00000020056

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:8:18443626..18449367(+)


>ENSPTRG00000020056
ATGTCGGAAGGAAACGCCGCCGGCGAGCCCAGCACGCCGGGAGGGCCCCGACCTCTCCTGACTGGGGCCCGGGGGCTCAT
CGGGCGGCGGCCGGCGCCTCCCCTCACCCCCGGCCGCCTTCCCTCCATCCGTTCCAGGGACCTCACCCTCGGGGGAGTCA
AGAAGAAAACCTTCACCCCAAATATCATCAGTCGGAAGATCAAGGAAGAGCCCAAGGAAGAAGTAACTGTCAAGAAGGAG
AAGCGTGAAAGAGACAGAGACCGACAACGAGAGGGGCATGGACGAGGGCGAGGCCGTCCAGAAGTGATCCAGTCTCACTC
CATCTTTGAGCAGGGCCCAGCCGAAATGATGAAGAAAAAAGGGAACTGGGATAAGACAGTGGATGTGTCAGACATGGGAC
CTTCTCATATCATCAACATCAAAAAAGAGAAGAGAGAGACAGACGAAGAAACTAAACAGATCTTGCGTATGCTGGAGAAG
GACGATTTCCTCGATGACCCCGGCCTGAGGAACGACACTCGAAATATGCCTGTGCAGCTGCCGCTGGCTCACTCAGGATG
GCTTTTTAAGGAAGAAAATGACGAACCAGATGTTAAACCTTGGCTGGCTGGCCCCAAGGAAGAGGACATGGAGGTGGACA
TACCTGCTGTGAAAGTGAAAGAGGAGCCACGAGATGAGGAGGAAGAGGCCAAGATGAAGGCTCCTCCCAAAGCAGCCAGG
AAGACTCCAGGCCTCCCGAAGGATGTATCTGTGGCAGAGCTGCTGAGGGAGCTGAGCCTCACCAAGGAAGAGGAACTGCT
GTTTCTGCAGCTGCCAGACACCCTCCCTGGCCAGCCACCCACCCAGGACATCAAGCCTATCAAGACAGAGGTGCAGGGCG
AGGACGGACAGGTGGTGCTCATCAAGCAGGAGAAAGACCGAGAAGCCAAGTTGGCAGAGAATGCTTGTACCCTGGCTGAC
CTGACAGAGGGTCAGGTTGGCAAGCTACTCATCCGCAAGTCTGGAAGGGTGCAACTCCTCCTGGGCAAGGTGACTCTGGA
CGTGACCATGGGAACTGCCTGCTCCTTCCTGCAGGAGCTGGTGTCCGTGGGCCTTGGAGACAGTAGGACAGGGGAGATGA
CAGTCCTGGGACACGTGAAGCACAAACTTGTATGTTCCCCTGATTTTGAATCTCTCTTGGATCACAAACACCGGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .51 RPM
SRP007412_cerebellum 15 .16 RPM
SRP007412_heart 9 .62 RPM
SRP007412_kidney 15 .22 RPM
SRP007412_liver 16 .30 RPM
SRP007412_testis 47 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000013488 ortholog_one2one 1 retrogene
retro_dnov_1681,
Equus caballus ENSECAG00000025090 ortholog_one2many 1 retrogene
retro_ecab_43,
Erinaceus europaeus ENSEEUG00000007632 ortholog_one2one 2 retrogenes
retro_eeur_277, retro_eeur_705,
Homo sapiens ENSG00000168495 ortholog_one2one 1 retrogene
retro_hsap_596,
Macropus eugenii ENSMEUG00000000465 ortholog_one2one 1 retrogene
retro_meug_1550,
Myotis lucifugus ENSMLUG00000002109 ortholog_one2one 1 retrogene
retro_mluc_2339,
Macaca mulatta ENSMMUG00000023226 ortholog_one2one 1 retrogene
retro_mmul_2449,
Monodelphis domestica ENSMODG00000009491 ortholog_one2one 1 retrogene
retro_mdom_988,
Nomascus leucogenys ENSNLEG00000015502 ortholog_one2one 1 retrogene
retro_nleu_2218,
Pongo abelii ENSPPYG00000018419 ortholog_one2one 1 retrogene
retro_pabe_594,
Tursiops truncatus ENSTTRG00000012745 ortholog_one2one 1 retrogene
retro_ttru_1189,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_439 75.06 99.75
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Download FASTA sequences of all ENSPTRG00000020056 retrocopies