Parental gene: | KCTD9, ENSPTRG00000020092 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 8:21716211..21746566(-) |
>ENSPTRG00000020092
ATGAGGCGGGTGACCCTGTTCCTGAACGGCAGCCCCAAGAACGGAAAGGTGGTTGCTGTATATGGAACTTTATCTGATTT
GCTTTCTGTGGCCAGCAGTAAACTCGGCATAAAAGCCACCAGTGTGTATAATGGGAAAGGTGGACTGATTGATGATATTG
CTTTGATCAGGGATGATGATGTTTTGTTTGTTTGTGAAGGAGAGCCATTTATTGATCCTCAGACAGATTCTAAGCCTCCT
GAGGGATTGTCAGGATTCCACACAGACTGGCTGACATTAAATGTTGGAGGGCGGTACTTTACAACTACACGGAGCACTTT
AGTGAATAAAGAACCTGACAGTATGCTGGCCCACATGTTTAAGGACAAAGGTGTCTGGGGAAATAAGCAAGATCATAGAG
GAGCTTTCTTAATTGACCGAAGTCCTGAGTACTTCGAACCCATTTTGAACTACTTGCGTCATGGACAGCTCATTGTAAAT
GATGGCATTAATTTATTGGGTGTGTTAGAAGAAGCAAGATTTTTTGGTATTGACTCATTGATTGAACACCTAGAAGTGGC
AATAAAGAATTCTCAACCACCGGAGGATCATTCACCAATATCCCGAAAGGAATTTGTCCGATTTTTGCTAGCAACTCCAA
CCAAGTCAGAACTGCGATGCCAGGGTTTGAACTTCAGTGGTGCTGATCTTTCTCGTTTGGACCTTCGATACATTAACTTC
AAAATGGCCAATTTAAGCCGCTGTAATCTTGCACATGCAAATCTTTGCTGTGCAAATCTTGAACGAGCTGATCTCTCTGG
ATCAGTGCTTGACTGTGCGAATCTCCAGGGAGTCAAGATGCTCTGTTCTAATGCAGAAGGAGCATCCCTGAAACTGTGTA
ATTTTGAGGATCCTTCTGGTCTTAAAGCCAATTTAGAAGGTGCTAATCTGAAAGGTGTGGATATGGAAGGAAGTCAGATG
ACAGGAATTAACCTGAGAGTGGCTACCTTAAAAAATGCAAAGTTGAAGAACTGTAACCTCAGAGGAGCAACTCTGGCAGG
AACTGATTTAGAGAATTGTGATCTGTCTGGGTGTGATCTTCAAGAAGCCAACCTGAGAGGGTCCAACGTGAAGGGAGCTA
TATTTGAAGAGATGCTGACACCACTACACATGTCACAAAGTGTCAGATGA
ATGAGGCGGGTGACCCTGTTCCTGAACGGCAGCCCCAAGAACGGAAAGGTGGTTGCTGTATATGGAACTTTATCTGATTT
GCTTTCTGTGGCCAGCAGTAAACTCGGCATAAAAGCCACCAGTGTGTATAATGGGAAAGGTGGACTGATTGATGATATTG
CTTTGATCAGGGATGATGATGTTTTGTTTGTTTGTGAAGGAGAGCCATTTATTGATCCTCAGACAGATTCTAAGCCTCCT
GAGGGATTGTCAGGATTCCACACAGACTGGCTGACATTAAATGTTGGAGGGCGGTACTTTACAACTACACGGAGCACTTT
AGTGAATAAAGAACCTGACAGTATGCTGGCCCACATGTTTAAGGACAAAGGTGTCTGGGGAAATAAGCAAGATCATAGAG
GAGCTTTCTTAATTGACCGAAGTCCTGAGTACTTCGAACCCATTTTGAACTACTTGCGTCATGGACAGCTCATTGTAAAT
GATGGCATTAATTTATTGGGTGTGTTAGAAGAAGCAAGATTTTTTGGTATTGACTCATTGATTGAACACCTAGAAGTGGC
AATAAAGAATTCTCAACCACCGGAGGATCATTCACCAATATCCCGAAAGGAATTTGTCCGATTTTTGCTAGCAACTCCAA
CCAAGTCAGAACTGCGATGCCAGGGTTTGAACTTCAGTGGTGCTGATCTTTCTCGTTTGGACCTTCGATACATTAACTTC
AAAATGGCCAATTTAAGCCGCTGTAATCTTGCACATGCAAATCTTTGCTGTGCAAATCTTGAACGAGCTGATCTCTCTGG
ATCAGTGCTTGACTGTGCGAATCTCCAGGGAGTCAAGATGCTCTGTTCTAATGCAGAAGGAGCATCCCTGAAACTGTGTA
ATTTTGAGGATCCTTCTGGTCTTAAAGCCAATTTAGAAGGTGCTAATCTGAAAGGTGTGGATATGGAAGGAAGTCAGATG
ACAGGAATTAACCTGAGAGTGGCTACCTTAAAAAATGCAAAGTTGAAGAACTGTAACCTCAGAGGAGCAACTCTGGCAGG
AACTGATTTAGAGAATTGTGATCTGTCTGGGTGTGATCTTCAAGAAGCCAACCTGAGAGGGTCCAACGTGAAGGGAGCTA
TATTTGAAGAGATGCTGACACCACTACACATGTCACAAAGTGTCAGATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .67 RPM |
| SRP007412_cerebellum | 4 .95 RPM |
| SRP007412_heart | 16 .58 RPM |
| SRP007412_kidney | 5 .75 RPM |
| SRP007412_liver | 2 .39 RPM |
| SRP007412_testis | 8 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012157 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000104756 | ortholog_one2many | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000010151 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000009629 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1225 | 87.72 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2166 | 91.52 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2825 | 91.82 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000020092 retrocopies