Parental gene: | AUH, ENSPTRG00000021099 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 9:90002258..90158755(-) |
>ENSPTRG00000021099
ATGGCGGCCGCGGTGGCGGCTGCACCTGGGGCCTTGGGATCCCTGCATGCTGGCGGCGCCCGCCTGGTGGCCGCTTGCAG
TGCGTGGCTCTGCCCGGGGTTGAGGCTGCCCGGCTCGTTGGCAGGCCGGCGAGTGGGCCCGGCGATCTGGGCCCAGGGCT
GGGTACCTGCGGCCGGGGGTCCCGCCCCGAAAAGGGGCTACAGCTCTGAGGTGAAGACGGAGGACGAGCTGCGGGTGCGG
CACCTGGAGGAGGAGAACCGAGGAATTGTGGTGCTTGGAATAAACAGAGCTTATGGCAAAAATTCACTCAGTAAAAATCT
TATAAAAATGCTATCAAAAGCTGTGGATGCTTTGAAATCTGATAAGAAAGTACGGACCATAATAATCAGGAGTGAAGTCC
CAGGGATATTCTGTGCTGGTGCTGACCTTAAGGAAAGAGCCAAAATGAGTTCCAGTGAAGTTGGTCCTTTTGTCTCCAAA
ATAAGAGCAGTGATTAACGATATTGCTAATCTTCCAGTACCAACAATTGCAGCAATAGATGGACTCGCTTTAGGTGGTGG
TCTTGAACTGGCTTTAGCCTGTGATATACGAGTAGCAGCTTCCTCTGCAAAAATGGGCCTGGTTGAAACAAAATTGGCGA
TTATTCCTGGTGGAGGGGGGACACAGCGATTGCCACGCGCCATTGGAATGTCCCTGGCCAAGGAGCTCATATTCTCTGCG
CGAGTCCTCGATGGCCAAGAAGCCAAAGCAGTGGGCTTAATCAGCCACGTTCTGGAACAGAACCAGGAGGGAGACGCAGC
CTACAGAAAGGCCTTGGACCTGGCGAGAGAGTTTTTACCTCAGGGACCTGTTGCAATGAGAGTGGCAAAATTAGCAATTA
ATCAAGGGATGGAGGTCGATTTAGTAACAGGGTTAGCCATAGAAGAAGCTTGTTATGCTCAGACCATTCCAACAAAAGAC
AGACTTGAAGGTCTTCTTGCTTTTAAAGAGAAAAGGCCCCCTCGCTATAAAGGAGAATAA
ATGGCGGCCGCGGTGGCGGCTGCACCTGGGGCCTTGGGATCCCTGCATGCTGGCGGCGCCCGCCTGGTGGCCGCTTGCAG
TGCGTGGCTCTGCCCGGGGTTGAGGCTGCCCGGCTCGTTGGCAGGCCGGCGAGTGGGCCCGGCGATCTGGGCCCAGGGCT
GGGTACCTGCGGCCGGGGGTCCCGCCCCGAAAAGGGGCTACAGCTCTGAGGTGAAGACGGAGGACGAGCTGCGGGTGCGG
CACCTGGAGGAGGAGAACCGAGGAATTGTGGTGCTTGGAATAAACAGAGCTTATGGCAAAAATTCACTCAGTAAAAATCT
TATAAAAATGCTATCAAAAGCTGTGGATGCTTTGAAATCTGATAAGAAAGTACGGACCATAATAATCAGGAGTGAAGTCC
CAGGGATATTCTGTGCTGGTGCTGACCTTAAGGAAAGAGCCAAAATGAGTTCCAGTGAAGTTGGTCCTTTTGTCTCCAAA
ATAAGAGCAGTGATTAACGATATTGCTAATCTTCCAGTACCAACAATTGCAGCAATAGATGGACTCGCTTTAGGTGGTGG
TCTTGAACTGGCTTTAGCCTGTGATATACGAGTAGCAGCTTCCTCTGCAAAAATGGGCCTGGTTGAAACAAAATTGGCGA
TTATTCCTGGTGGAGGGGGGACACAGCGATTGCCACGCGCCATTGGAATGTCCCTGGCCAAGGAGCTCATATTCTCTGCG
CGAGTCCTCGATGGCCAAGAAGCCAAAGCAGTGGGCTTAATCAGCCACGTTCTGGAACAGAACCAGGAGGGAGACGCAGC
CTACAGAAAGGCCTTGGACCTGGCGAGAGAGTTTTTACCTCAGGGACCTGTTGCAATGAGAGTGGCAAAATTAGCAATTA
ATCAAGGGATGGAGGTCGATTTAGTAACAGGGTTAGCCATAGAAGAAGCTTGTTATGCTCAGACCATTCCAACAAAAGAC
AGACTTGAAGGTCTTCTTGCTTTTAAAGAGAAAAGGCCCCCTCGCTATAAAGGAGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 8 .76 RPM |
| SRP007412_cerebellum | 7 .49 RPM |
| SRP007412_heart | 4 .20 RPM |
| SRP007412_kidney | 8 .81 RPM |
| SRP007412_liver | 2 .49 RPM |
| SRP007412_testis | 2 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005695 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000001066 | ortholog_one2one | 1 retrogene | |
| Oreochromis niloticus | ENSONIG00000011227 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017688 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1612 | 99.12 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000021099 retrocopies