Parental gene:

CDYL, ENSPTRG00000017688

Aliases:None
Description:chromodomain protein, Y-like [Source:HGNC Symbol;Acc:1811]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:6:4723725..4973438(+)


>ENSPTRG00000017688
ATGGCATTTCAGGCAAGCCACAGGCCAGCCTGGGGAAAAAGCAGGAAGAAAAACTGGCAATACGAGGGCCCAACCCAAAA
GTTATTCCTGAAGAGAAACAACGTGTCAGCACCAGATGGGCCTTCAGACCCCAGCATCTCCGCGAGCAGTGAGCAAAGCG
GGGCACAGCAGCCTCCCGGTTTACAGGTTGAAAGGATTGTTGACAAAAGGAAAAATAAAAAAGGGAAGACAGAGTATTTG
GTTCGGTGGAAAGGCTATGACAGCGACGACGACACTTGGGAGCCGGAACAGCACCTCGTGAACTGTGAGGAATACATCCA
CGACTTCAACAGACGCCACACGGAGAAGCAGAAGGAGAGCACATTGACCAGAACAAACAGGACCTCTCCCAACAATGCTA
GGAAACAAATCTCCAGATCCACCAACAGCAACTTTTCTAAGACCTCTCCTAAGGCACTCGTGATTGGGAAAGACCACGAA
TCCAAAAACAGCCAGCTGTTTGCTGCCAGCCAGAAGTTCAGGAAGAACACAGCTCCATCTCTCTCCAGCCGGAAGAACAT
GGACCTAGCGAAGTCAGGTATCAAGATCCTCGTGCCTAAAAGCCCCGTTAAGAGCAGGACCGCAGTGGACGGCTTTCAGA
GCGAGAGCCCCGAGAAACTGGACCCCGTCGAGCAGGGTCAGGAGGACACAGTGGCACCCGAAGTGGCAGCGGAAAAGCCG
GTCGGAGCTTTATTGGGCCCCGGTGCCGAGAGAGCCAGGATGGGGAGCAGGCCCAGGATACACCCGCTAGTGCCTCAGGT
GCCCGGCCCTGTGACTGCAGCCATGGCCACAGGCTTAGCTGTTAACGGGAAAGGTACATCTCCGTTCATGGATGCATTAA
CAGCCAATGGGACAACCAACATACAGACATCTGTTACAGGAGTGACTGCCAGCAAAAGGAAATTTATTGACGACAGAAGA
GACCAGCCTTTTGACAAGCGATTGCGTTTCAGCGTGAGGCAAACAGAAAGTGCCTACAGATACAGAGATATTGTGGTCAG
GAAGCAGGATGGCTTCACCCACATCTTGTTATCCACAAAGTCCTCAGAGAATAACTCACTAAATCCAGAGGTAATGAGAG
AAGTCCAGAGTGCTCTGAGCACGGCCGCTGCCGATGACAGCAAGCTGGTACTGCTCAGCGCCGTTGGCAGCGTCTTCTGT
TGTGGACTTGACTTTATTTATTTTATACGACGTCTGACAGATGACAGGAAAAGAGAAAGCACTAAAATGGCAGAAGCTAT
CAGAAACTTCGTGAATACTTTCATTCAATTTAAGAAGCCCATTATTGTAGCAGTCAATGGCCCAGCCATTGGTCTAGGAG
CATCTATATTGCCTCTTTGCGATGTGGTTTGGGCTAATGAAAAGGCTTGGTTTCAAACACCCTATACCACCTTCGGACAG
AGTCCAGATGGCTGTTCTACCGTTATGTTTCCCAAGATAATGGGAGGAGCATCTGCAAACGAGATGCTGCTCAGTGGACG
GAAGCTGACGGCGCAGGAGGCGTGTGGCAAGGGCCTGGTCTCCCAGGTGTTTTGGCCCGGGACATTCACTCAGGAAGTGA
TGGTTCGCATTAAGGAGCTTGCCTCGTGCAATCCAGTTGTGCTTGAGGAATCCAAAGCCCTCGTGCGCTGCAACATGAAG
ATGGAGCTGGAGCAGGCCAACGAGAGGGAGTGTGAGGTGCTGAAGAAAATCTGGGGCTCGGCCCAGGGGATGGACTCCAT
GTTAAAGTACTTGCAGAGGAAGATCGATGAGTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 6 .92 RPM
SRP007412_cerebellum 13 .41 RPM
SRP007412_heart 12 .71 RPM
SRP007412_kidney 14 .98 RPM
SRP007412_liver 14 .34 RPM
SRP007412_testis 21 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011787 ortholog_one2many 1 retrogene
retro_chof_525,
Callithrix jacchus ENSCJAG00000021374 ortholog_one2one 5 retrogenes
retro_cjac_2675, retro_cjac_3927, retro_cjac_4003, retro_cjac_4228, retro_cjac_4229,
Homo sapiens ENSG00000153046 ortholog_one2one 1 retrogene
retro_hsap_4651,
Otolemur garnettii ENSOGAG00000015920 ortholog_one2many 2 retrogenes
retro_ogar_2406, retro_ogar_3269,
Pan troglodytes ENSPTRG00000021099 other_paralog 1 retrogene
retro_ptro_1612,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3090 74.53 61.87
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Download FASTA sequences of all ENSPTRG00000017688 retrocopies