Parental gene:

SSX9, ENSPTRG00000021857

Aliases:None
Description:synovial sarcoma, X breakpoint 9 [Source:HGNC Symbol;Acc:19655]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:X:48658742..48666747(-)


>ENSPTRG00000021857
ATGAACGGAGACGACGCCTTTGCAAGGAGACCTAAGGCTGGTGCTCAAATACCAGAGAAGATACAAAAGGCCTTCGATGA
TATTGCCAAATACTTCTCTAAGAAAGAGTGGGAAAAGATGAAATCCTCGGAGAAAATCAGCTATGTGTATATGAAGAGAA
AGTATGAGGCCATGACTAAACTAGGTTTCAAGGCTACCCTCCCACCTTTCATGCGTAATACAGGGGCCACAGACCTCCAG
GGGAATGATTTTGATAATGACCGTAACCACAGGAATCAGGTTGAACGTCCTCAGATGACTTTCGGCAGGCTCCAGGGAAT
CTTCCCGAAGATCATGCCCAAGAAGCCAGCAGAGGTAGGAAATGATTCGAAGGTGCCAGAAGCATCTGGCTCACAGAACA
ATGGGAAACAGCTGTGCCCCCCGGGAAAACGAACTACCTCTGAGAAGATTAACAAGGCATCTGGACCCAAAAGGGGGAAA
CATGCCTGGACCCACAGACTGAGTGAGAGAAAGCAGCTGGTGATTTATGAAGAGATCAGCGACCCTGAGGAAGACAACGA
GTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 1 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014776 ortholog_one2many 1 retrogene
retro_cjac_2373,
Ictidomys tridecemlineatus ENSSTOG00000015375 ortholog_one2many 3 retrogenes
retro_itri_1394, retro_itri_1855, retro_itri_746,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2385 70.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000021857 retrocopies