Parental gene: | TERF1, ENSPTRG00000022919 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 8:70940361..70978741(+) |
>ENSPTRG00000022919
ATGGCGGAGGACGTCTCCTCAGCGGCCCCGAGCCCGCGGGGCTGTGCGGATGGTAGGGATGCCGACCCTACTGAGAAGCA
GATGGCAGAAACAGAGAGAAACGACGAGGAGCAGTTCGAATGCCAGGAACTGCTCGAGTGCCAGGTGCAGGTGGGGGCCC
CCGATGAGGAGGAGGAGGAGGAGGAGGACGCGGGCCTGGTGGCCGAGGCCGAGGCCGTGGCTGCCGGCTGGATGCTCGAT
TTCCTCTGCCTCTCTCTTTGCCGAGCTTTCCGCGACGGCCGCTCCGAGGACTTCCGCAGGACCCGCAACAGCGCAGAGGC
TATTATTCATGGACTATCCAGTCTAACAGCTTACCAGTTGAGAACGATATACATATGTCAGTTTTTGACGAGAATTGCAG
CAGGAAAAACCCTTGATGCACAGTTTGAAAATGATGAACGAATTACACCTTTGGAATCAGCCCTGATGATTTGGGGTTCA
ATTGAAAAGGAACATGACAAACTTCATGAAGAAATACAGAATTTAATTAAAATTCAGGCTATAGCTGTTTGTATGGAAAA
TGGCAACTTTAAAGAAGCAGAAGAAGTCTTTGAAAGAATATTTGGTGATCCAAATTCTCATATGCCTTTCAAAAGCAAAT
TGCTTATGATAATCTCTCAGAAAGATACATTTCATTCCTTTTTTCAACACTTCAGCTACAACCACATGATGGAGAAAATT
AAGAGTTATGTGAATTATGTGCTAAGTGAAAAATCATCAACCTTTCTAATGAAGGCAGCGGCAAAAGTAGTAGAAAGCAA
AAGGACAAGAACAATAACTTCTCAAGATAAACCTAGTGGTAATGATGTTGAAATGGAAACTGAAGCTAATTTGGATACAA
GAAAAAGTGTTAGTGACAAACAGTCTGCGGTAACTGAATCCTCAGAGGGTACAGTATCCTTATTGAGGTCTCACAAGAAT
CTTTTCTTTTCTAAGTTGCAACATGGAACCCAGCAACAAGACCTTACTAAGAAAGAAAGAAGAGTAGGAACTCTTCAAAG
TACAAAAAAGAAAAAAGAAAGCAGAAGAGCCACTGAAAGCAGAATACCTGTTTCCAAGAGTCAGCCGGTAACTCCTGAAA
AACATCGAGCTAGAAAAAGACAGGCATGGCTTTGGGAAGAAGACAAGAATTTGAGATCTGGTGTGAGGAAATATGGAGAG
GGAAACTGGTCTAAAATACTGTTGCATTATAAATTCAACAACCGGACAAGTGTCATGTTAAAAGACAGATGGAGGACCAT
GAAGAAACTAAAACTGATTTGCTCAGACAGCGAAGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 15 .26 RPM |
| SRP007412_cerebellum | 16 .53 RPM |
| SRP007412_heart | 7 .87 RPM |
| SRP007412_kidney | 12 .08 RPM |
| SRP007412_liver | 5 .79 RPM |
| SRP007412_testis | 14 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000002407 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000007714 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000147601 | ortholog_one2one | 6 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000002793 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_611 | 91.75 | 69.02 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
| 2. | retro_ptro_802 | 90.71 | 63.78 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 3. | retro_ptro_1245 | 86.58 | 67.43 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 4. | retro_ptro_1445 | 86.58 | 67.43 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 5. | retro_ptro_2095 | 85.17 | 66.06 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 6. | retro_ptro_3236 | 84.49 | 69.02 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 7. | retro_ptro_3241 | 92.55 | 58.09 | Please wait, loading |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSPTRG00000022919 retrocopies