Parental gene: | SAP18, ENSPVAG00000016315 |
| Aliases: | None |
| Description: | Sin3A-associated protein, 18kDa [Source:HGNC Symbol;Acc:10530] |
| Organism: | Megabat (Pteropus vampyrus) |
| Coordinates: | scaffold_12099:23818..27207(-) |
>ENSPVAG00000016315
ATGGCGGTGGAGTCGCGCGTCACCCAGGAGGAGATCAAGAAGGAGCCCGAGAAGCCCATCGATCGGGAGAAGACGTGCCC
GCTGCTGCTGCGCGTGTTCACCACCAACAACGGCCGCCACCACCGCATGGACGAGTTCTCCCGCGGCAACGTGCCATCCA
GCGAGCTGCAGATCTACACCTGGATGGATGCAACTTTGAAAGAGCTGACGAGTCTAGTGAAAGAAGTCTACCCAGAAGCC
AGGAAGAAGGGCACGCACTTCAATTTTGCAATTGTCTTTACAGATATTAAAAGACCTGGCTATCGAGTCAAGGAGATCGG
CAGCACCATGTCTGTGAGGAAGGGGACCGACGACGCCATGACCCTGCAGTCGCAGAAGTTCCAGATAGGAGACTACTTGG
ACATAGCCATCACCCCTCCAAATCGGGCACCGCCTCCTTCCGGGCGCATGAGGCCGTATTAA
ATGGCGGTGGAGTCGCGCGTCACCCAGGAGGAGATCAAGAAGGAGCCCGAGAAGCCCATCGATCGGGAGAAGACGTGCCC
GCTGCTGCTGCGCGTGTTCACCACCAACAACGGCCGCCACCACCGCATGGACGAGTTCTCCCGCGGCAACGTGCCATCCA
GCGAGCTGCAGATCTACACCTGGATGGATGCAACTTTGAAAGAGCTGACGAGTCTAGTGAAAGAAGTCTACCCAGAAGCC
AGGAAGAAGGGCACGCACTTCAATTTTGCAATTGTCTTTACAGATATTAAAAGACCTGGCTATCGAGTCAAGGAGATCGG
CAGCACCATGTCTGTGAGGAAGGGGACCGACGACGCCATGACCCTGCAGTCGCAGAAGTTCCAGATAGGAGACTACTTGG
ACATAGCCATCACCCCTCCAAATCGGGCACCGCCTCCTTCCGGGCGCATGAGGCCGTATTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000006309 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000607 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000021963 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000010732 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000005454 | ortholog_one2one | 22 retrogenes |
retro_tsyr_1018, retro_tsyr_1117, retro_tsyr_1225, retro_tsyr_1342, retro_tsyr_1439, retro_tsyr_1490, retro_tsyr_1578, retro_tsyr_1708, retro_tsyr_1767, retro_tsyr_1851, retro_tsyr_1938, retro_tsyr_2118, retro_tsyr_2179, retro_tsyr_398, retro_tsyr_451, retro_tsyr_563, retro_tsyr_826, retro_tsyr_837, retro_tsyr_886, retro_tsyr_892, retro_tsyr_901, retro_tsyr_967,
|
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pvam_43 | 68.39 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pvam_1246 | 86.49 | 96.73 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPVAG00000016315 retrocopies