Parental gene: | Rfc5, ENSRNOG00000001134 |
| Aliases: | None |
| Description: | replication factor C subunit 5 [Source:RefSeq peptide;Acc:NP_001100616] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 12:46752011..46761552(+) |
>ENSRNOG00000001134
ATGGCGGCGGCGCCTTCGCAGCAGCAGCCCCGGGCGGCCCGGGCCCGGAACCTGCCCTGGGTTGAGAAGTACCGGCCACA
GACTCTGGCCGATCTCATATCTCACCAGGACATCCTGAGTACCATTCAGAAGTTCATCAGTGAAGACCGCTTGCCACACC
TACTTCTCTATGGCCCTCCAGGCACAGGAAAGACATCCACCATTCTGGCCTGTGCCAAGCAACTGTACAAAGATAAAGAA
TTCGGCTCCATGGTCTTGGAGCTGAATGCTTCCGACGACCGAGGGATCGATATTGTCCGGGGGCCAATCCTCAGCTTTGC
CAGCACAAGGACAATCTTCAAGAGAGGGTTTAAGCTTGTGATCCTGGACGAAGCTGACGCCATGACTCAAGATGCCCAGA
ATGCCTTGAGACGAGTGATTGAGAAGTTCACTGAAAACACCAGGTTTTGCCTCATCTGTAACTACCTGTCCAAGATCATC
CCTGCCTTGCAGTCACGGTGCACGAGGTTCCGATTTGGCCCTCTGACGCCTGAGCTCATGGTTCCTCGGCTAGAACATGT
GGTACAAGAAGAGAACGTGGACATAAGTGAAGATGGAATGAAGGCCCTTGTCACTCTGTCCAGTGGGGACATGCGAAGGG
CTTTGAACATTCTGCAGAGTACCAATATGGCCTTTGGGAAGGTGACAGAGGAGACTGTCTACACCTGCACCGGGCACCCA
CTCAAGACGGATATTGCCAATATTCTAGACTGGATGCTGAATCAAGACTTCACCACTGCCTACAAAAATATCATGGAGCT
GAAGACTCTGAAGGGCTTGGCACTGCACGACATCTTGACAGAGGTTCACTTGTTTGTGCACAGAGTTGACTTTCCGTCTT
CAGTTCGGATGCATTTATTGACCAAAATGGCAGACATTGAGTACAGGCTCTCTGTCGGCACCAGTGAGAAGATCCAGCTG
AGCTCCCTCATTGCTGCTTTTCAAGTTACCAGGGACTTGATAGTTGCAGAGGCCTAG
ATGGCGGCGGCGCCTTCGCAGCAGCAGCCCCGGGCGGCCCGGGCCCGGAACCTGCCCTGGGTTGAGAAGTACCGGCCACA
GACTCTGGCCGATCTCATATCTCACCAGGACATCCTGAGTACCATTCAGAAGTTCATCAGTGAAGACCGCTTGCCACACC
TACTTCTCTATGGCCCTCCAGGCACAGGAAAGACATCCACCATTCTGGCCTGTGCCAAGCAACTGTACAAAGATAAAGAA
TTCGGCTCCATGGTCTTGGAGCTGAATGCTTCCGACGACCGAGGGATCGATATTGTCCGGGGGCCAATCCTCAGCTTTGC
CAGCACAAGGACAATCTTCAAGAGAGGGTTTAAGCTTGTGATCCTGGACGAAGCTGACGCCATGACTCAAGATGCCCAGA
ATGCCTTGAGACGAGTGATTGAGAAGTTCACTGAAAACACCAGGTTTTGCCTCATCTGTAACTACCTGTCCAAGATCATC
CCTGCCTTGCAGTCACGGTGCACGAGGTTCCGATTTGGCCCTCTGACGCCTGAGCTCATGGTTCCTCGGCTAGAACATGT
GGTACAAGAAGAGAACGTGGACATAAGTGAAGATGGAATGAAGGCCCTTGTCACTCTGTCCAGTGGGGACATGCGAAGGG
CTTTGAACATTCTGCAGAGTACCAATATGGCCTTTGGGAAGGTGACAGAGGAGACTGTCTACACCTGCACCGGGCACCCA
CTCAAGACGGATATTGCCAATATTCTAGACTGGATGCTGAATCAAGACTTCACCACTGCCTACAAAAATATCATGGAGCT
GAAGACTCTGAAGGGCTTGGCACTGCACGACATCTTGACAGAGGTTCACTTGTTTGTGCACAGAGTTGACTTTCCGTCTT
CAGTTCGGATGCATTTATTGACCAAAATGGCAGACATTGAGTACAGGCTCTCTGTCGGCACCAGTGAGAAGATCCAGCTG
AGCTCCCTCATTGCTGCTTTTCAAGTTACCAGGGACTTGATAGTTGCAGAGGCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 4 .30 RPM |
| SRP017611_kidney | 9 .77 RPM |
| SRP017611_brain | 11 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000015326 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000029363 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000010377 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1139 | 86.60 | 85.21 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000001134 retrocopies