Parental gene: | Spop, ENSRNOG00000004686 |
| Aliases: | None |
| Description: | speckle-type POZ protein [Source:RefSeq peptide;Acc:NP_001093966] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:83040648..83121496(+) |
>ENSRNOG00000004686
ATGTCAAGGGTTCCAAGTCCTCCACCTCCGGCAGAAATGTCGAGTGGTCCTGTTGCTGAGAGCTGGTGCTATACACAGAT
CAAGGTAGTGAAGTTCTCCTACATGTGGACCATCAATAACTTTAGTTTTTGCCGGGAGGAAATGGGTGAAGTCATAAAAA
GTTCAACTTTTTCATCAGGAGCCAATGATAAGCTGAAATGGTGTTTGCGAGTAAACCCGAAGGGGCTGGATGAGGAAAGC
AAAGATTACCTGTCGCTCTACCTGTTGTTGGTCAGCTGTCCAAAGAGTGAGGTTCGGGCCAAGTTCAAGTTCTCCATCCT
GAATGCCAAGGGAGAAGAAACCAAAGCTATGGAGAGCCAGCGAGCTTATAGGTTCGTGCAAGGCAAAGACTGGGGATTCA
AAAAATTCATCCGTAGAGATTTTCTCTTGGACGAGGCCAATGGACTTCTCCCTGATGACAAGCTCACCCTCTTCTGCGAG
GTGAGTGTAGTCCAAGACTCTGTCAATATCTCTGGGCAGAACACTATGAACATGGTAAAGGTCCCTGAATGCCGGTTGGC
TGACGAGTTAGGAGGGCTGTGGGAGAACTCTCGATTCACAGACTGCTGCTTGTGTGTGGCTGGCCAAGAATTCCAGGCTC
ACAAGGCTATCTTAGCAGCTCGGTCTCCAGTTTTCAGTGCCATGTTTGAACATGAAATGGAGGAGAGCAAAAAGAATCGG
GTTGAAATTAACGATGTAGAACCTGAAGTTTTTAAGGAAATGATGTGCTTCATCTACACGGGGAAGGCACCAAACCTTGA
CAAAATGGCTGATGATTTGCTGGCAGCTGCTGACAAGTACGCCCTGGAGCGTTTGAAGGTCATGTGCGAGGATGCCCTCT
GCAGTAACCTCTCTGTGGAGAACGCTGCAGAGATTCTCATCCTGGCTGACCTCCACAGCGCAGATCAGCTGAAAACCCAG
GCAGTGGATTTCATCAACTATCATGCTTCGGATGTCTTGGAGACCTCTGGGTGGAAGTCAATGGTGGTGTCACATCCCCA
CTTAGTGGCAGAAGCGTACCGCTCTCTGGCTTCCGCACAATGCCCTTTCCTGGGGCCCCCGCGCAAACGCCTGAAGCAAT
CCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 132 .65 RPM |
| SRP017611_kidney | 62 .94 RPM |
| SRP017611_liver | 36 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000011013 | ortholog_many2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012793 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000042221 | within_species_paralog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000047767 | within_species_paralog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_534 | 53.81 | 59.09 | Please wait, loading  |
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| 2. | retro_rnor_1677 | 53.23 | 53.21 | Please wait, loading |
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Download FASTA sequences of all ENSRNOG00000004686 retrocopies