Parental gene: | Snrpb, ENSRNOG00000006961 |
| Aliases: | None |
| Description: | small nuclear ribonucleoprotein-associated protein B [Source:RefSeq peptide;Acc:NP_599185] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 3:129196989..129204596(-) |
>ENSRNOG00000006961
ATGACGGTGGGCAAGAGCAGCAAGATGCTGCAGCACATCGACTACAGGATGAGGTGCATCCTGCAAGATGGCCGGATCTT
CATCGGGACCTTCAAAGCTTTTGACAAGCATATGAACTTGATCCTCTGTGACTGTGATGAGTTCAGGAAGATCAAGCCAA
AGAACTCCAAACAAGCAGAAAGAGAAGAGAAGCGAGTCCTTGGTCTGGTGTTGCTTCGAGGAGAGAACCTGGTCTCCATG
ACAGTAGAAGGACCTCCTCCCAAAGATACTGGCATTGCCCGAGTGCCACTTGCTGGAGCTGCTGGGGGGCCAGGCATCGG
CAGGGCTGCTGGCAGAGGAATCCCGGCGGGTGTGCCCATGCCCCAGGCTCCTGCAGGGCTTGCTGGACCAGTGCGAGGTG
TTGGAGGGCCGTCCCAGCAGGTGATGACCCCACAAGGAAGAGGCACTGTGGCAGCTGCTGCAGCTGCAGCCACAGCCAGT
ATTGCAGGAGCCCCAACTCAGTACCCACCTGGTCGTGGGGGTCCTCCTCCACCTATGGGCCGAGGGGCACCTCCTCCAGG
TATGATGGGCCCACCTCCTGGCATGAGGCCTCCCATGGGTCCCCCAATGGGGATCCCTCCTGGCCGAGGAACTCCAATGG
GCATGCCCCCTCCTGGGATGCGACCTCCTCCTCCAGGCATGCGAGGTCTGCTTTGA
ATGACGGTGGGCAAGAGCAGCAAGATGCTGCAGCACATCGACTACAGGATGAGGTGCATCCTGCAAGATGGCCGGATCTT
CATCGGGACCTTCAAAGCTTTTGACAAGCATATGAACTTGATCCTCTGTGACTGTGATGAGTTCAGGAAGATCAAGCCAA
AGAACTCCAAACAAGCAGAAAGAGAAGAGAAGCGAGTCCTTGGTCTGGTGTTGCTTCGAGGAGAGAACCTGGTCTCCATG
ACAGTAGAAGGACCTCCTCCCAAAGATACTGGCATTGCCCGAGTGCCACTTGCTGGAGCTGCTGGGGGGCCAGGCATCGG
CAGGGCTGCTGGCAGAGGAATCCCGGCGGGTGTGCCCATGCCCCAGGCTCCTGCAGGGCTTGCTGGACCAGTGCGAGGTG
TTGGAGGGCCGTCCCAGCAGGTGATGACCCCACAAGGAAGAGGCACTGTGGCAGCTGCTGCAGCTGCAGCCACAGCCAGT
ATTGCAGGAGCCCCAACTCAGTACCCACCTGGTCGTGGGGGTCCTCCTCCACCTATGGGCCGAGGGGCACCTCCTCCAGG
TATGATGGGCCCACCTCCTGGCATGAGGCCTCCCATGGGTCCCCCAATGGGGATCCCTCCTGGCCGAGGAACTCCAATGG
GCATGCCCCCTCCTGGGATGCGACCTCCTCCTCCAGGCATGCGAGGTCTGCTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 24 .21 RPM |
| SRP017611_kidney | 69 .71 RPM |
| SRP017611_brain | 22 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000006693 | possible_ortholog | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020971 | possible_ortholog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000027404 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016149 | possible_ortholog | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000015976 | within_species_paralog | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_474 | 63.27 | 83.12 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2825 | 71.76 | 55.41 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000006961 retrocopies