Parental gene: | Ddx41, ENSRNOG00000012771 |
| Aliases: | None |
| Description: | probable ATP-dependent RNA helicase DDX41 [Source:RefSeq peptide;Acc:NP_001101516] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 17:11740660..11746052(+) |
>ENSRNOG00000012771
ATGGAGGAGTCGGAACCCGAGCGGAAGCGGGCTCGCACGAACGAGGCGACTGCGGGTGGGAGCCGCTCCGAGGACGAAGA
TGAGGACGACGAGGACTACGTGCCCTACGTGCCGTTGCGGCAGCGCCGGCAGCTTCTGCTCCAGAAGCTGCTGCAGCGAA
GACGCAAGGGAGCTGCAGAGGAAGAGCAGCAGGACAGTGGCAGTGAGCCCCGAGGAGATGAGGACGACATCCCGCTGGGT
CCTCAGTCCAATGTCAGCCTCCTGGATCAGCACCAGCACCTCAAAGAGAAGGCTGAAGCACGCAAGGAGTCCGCCAAGGA
AAAGCAACTGAAGGAAGAAGAAAAGATTCTGGAGAGTGTGGCTGAAGGCCGAGCCTTGATGTCAGTGAAGGAAATGGCCA
AAGGCATTACCTACGACGATCCAATCAAAACTAGTTGGACACCCCCGCGCTATGTCCTGAGCATGTCAGAAGAGCGGCAC
GAGCGTGTTCGGAAGAAGTACCACATCCTGGTGGAGGGAGACGGTATCCCGCCACCCATCAAGAGCTTCAAGGAAATGAA
GCTCCCTGCAGCTATCCTTCGAGGCCTGAAGAAAAAGGGCATCCTCCACCCAACACCCATTCAGATCCAGGGCATCCCTA
CCATTCTGTCTGGTCGGGACATGATTGGCATCGCCTTCACGGGGTCAGGCAAGACTCTGGTATTCACACTGCCCGTCATC
ATGTTCTGCCTGGAACAAGAGAAGCGGTTGCCTTTCTCCAAGCGGGAAGGGCCTTATGGACTTATCATCTGCCCCTCACG
AGAGCTGGCTCGGCAGACCCATGGCATCCTGGAGTATTACTGCCGTCTGCTGCAGGAAGACAGCTCCCCTCTCCTGCGCT
GCGCACTCTGCATCGGGGGCATGTCGGTGAAGGAGCAGATGGAGACCATCCGACATGGTGTGCACATGATGGTAGCCACA
CCGGGACGCCTCATGGATTTGCTGCAGAAGAAAATGGTCAGCCTAGACATCTGCCGCTACCTGGCCCTGGATGAGGCTGA
CCGCATGATCGACATGGGCTTTGAGGGTGACATCCGTACCATCTTCTCCTACTTCAAGGGCCAGCGGCAGACTCTGCTCT
TCAGTGCCACCATGCCGAAGAAGATTCAGAACTTCGCCAAGAGCGCCCTGGTCAAGCCTGTCACCATCAATGTTGGTCGT
GCTGGAGCAGCCAGCCTTGACGTCATCCAGGAGGTGGAATATGTGAAGGAGGAAGCCAAGATGGTGTACCTGCTTGAGTG
CTTGCAGAAGACGCCCCCACCTGTACTCATCTTTGCAGAGAAGAAAGCAGATGTGGATGCCATTCACGAATACCTCCTGC
TCAAAGGAGTTGAGGCTGTGGCCATTCATGGGGGCAAAGACCAGGAAGAGCGGACCAAGGCCATTGAGGCATTCCGGGAA
GGCAAGAAGGACGTCTTAGTGGCCACGGACGTGGCCTCTAAAGGCCTAGACTTTCCTGCCATCCAGCACGTCATCAACTA
TGACATGCCTGAAGAAATCGAGAACTATGTGCACCGAATCGGCCGCACTGGGCGCTCAGGAAACACAGGCATTGCCACCA
CCTTTATCAACAAGGCCTGCGATGAGTCAGTGCTCATGGACCTCAAAGCCTTGCTGCTGGAGGCCAAGCAGAAGGTACCA
CCTGTTCTGCAAGTGCTGCACTGTGGGGATGAGTCCATGCTGGACATCGGAGGAGAACGGGGCTGCGCCTTCTGTGGAGG
CCTTGGTCATCGAATCACTGACTGCCCCAAACTCGAAGCTATGCAGACCAAGCAGGTCAGCAACATTGGCCGCAAGGACT
ACCTGGCGCACAGCTCCATGGACTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 27 .03 RPM |
| SRP017611_kidney | 44 .17 RPM |
| SRP017611_liver | 17 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000008770 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000026418 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000014375 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011123 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000014005 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2396 | 93.62 | 60.45 | Please wait, loading  |
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Download FASTA sequences of all ENSRNOG00000012771 retrocopies