Parental gene:

Tcp1, ENSRNOG00000014160

Aliases:Tcp1, CCTalpha, Tcp-1
Description:T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P28480]
Organism:Rat (Rattus norvegicus)
Coordinates:1:51719054..51726734(+)


>ENSRNOG00000014160
ATGGAGGGTCCTTTGTCCGTGTTCGGGGACCGCAGCACTGGGGAAGCGATCCGCTCCCAGAACGTTATGGCTGCAGCTTC
TATTGCCAACATTGTTAAAAGTTCTCTTGGGCCAGTTGGCTTGGATAAAATGTTGGTGGATGATATTGGTGATGTAACTA
TTACTAATGATGGGGCCACCATTCTGAAATTATTGGAGGTGGAACATCCTGCAGCCAAAGTTCTGTGTGAACTGGCTGAC
CTGCAAGACAAAGAAGTTGGAGATGGAACTACCTCAGTGGTAATCATTGCAGCGGAGCTTCTGAAAAATGCTGATGAGCT
AGTCAAGCAGAAAATTCATCCGACATCAGTTATTAGTGGCTATCGTCTTGCCTGCAAGGAAGCAGTGCGATATATCAATG
AGAACCTAATTATCAACACAGACGAACTTGGAAGAGACTGTCTGATCAATGCTGCTAAGACATCCATGTCTTCCAAAATT
ATTGGAATAAATGGTGATTTCTTCGCTAATATGGTGGTAGACGCTGTGCTTGCTGTTAAATACACAGATATACGAGGCCA
GCCTCGCTATCCAGTCAATTCTGTTAATATTCTAAAAGCCCACGGGAGAAGTCAGATAGAAAGCATGCTGATCAATGGCT
ATGCACTCAACTGTGTGGTTGGATCTCAGGGCATGCTCAAGAGAATAGTTAATGCAAAAATTGCTTGTCTTGACTTCAGC
CTGCAGAAAACAAAAATGAAGCTTGGTGTACAGGTGGTTATTACAGACCCTGAGAAACTGGACCAGATTAGACAGAGAGA
ATCCGATATCACCAAGGAGAGAATTCAGAAGATCCTGGCAACTGGTGCCAACGTTATTCTAACCACCGGTGGGATTGATG
ACATGTGTCTGAAGTATTTTGTGGAAGCTGGTGCCATGGCTGTTAGGAGAGTTTTAAAAAGAGACCTCAAACGTATTGCA
AAAGCTTCTGGAGCAAGTATCCTGTCTACACTGGCCAATTTGGAAGGTGAAGAGACTTTTGAGGCAACAATGTTGGGACA
AGCGGAAGAGGTCGTACAGGAGAGGATTTGTGACGATGAGCTGATCTTAATCAAAAATACTAAGGCTCGTACGTCAGCTT
CAATTATCTTACGAGGGGCAAACGACTTCATGTGTGATGAAATGGAACGCTCCTTACATGACGCTCTTTGTGTGGTGAAG
AGAGTTTTGGAGTCAAAGTCTGTGGTCCCAGGTGGAGGTGCTGTAGAAGCGGCCTTGTCTATATACCTTGAAAACTATGC
GACCAGTATGGGATCTCGGGAACAGCTTGCTATTGCAGAGTTTGCAAGATCTCTGCTTGTGATTCCTAATACACTGGCAG
TGAATGCTGCCCAAGACTCCACTGACCTGGTTGCCAAGTTAAGAGCTTTTCACAATGAGGCTCAAGTTAACCCAGAACGT
AAAAATCTAAAGTGGATTGGTCTTGATTTGGTCCATGGGAAACCACGAGACAATAAGCAAGCGGGGGTGTTTGAACCAAC
CATAGTTAAAGTAAAGAGCCTGAAGTTTGCAACAGAGGCTGCAATCACCATACTTCGGATTGATGATCTGATAAAATTAC
ACCCAGAAAGCAAAGACGACAAACACGGAGGTTATGAAAATGCTGTTCACTCTGGAGCCCTTGATGACTGA

Library Parental gene expression (RPM)
SRP017611_liver 44 .85 RPM
SRP017611_kidney 62 .32 RPM
SRP017611_brain 46 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015405 ortholog_one2one 1 retrogene
retro_amel_828,
Equus caballus ENSECAG00000017953 ortholog_one2one 1 retrogene
retro_ecab_798,
Macaca mulatta ENSMMUG00000012846 possible_ortholog 1 retrogene
retro_mmul_1696,
Oryctolagus cuniculus ENSOCUG00000013847 ortholog_one2one 1 retrogene
retro_ocun_1577,
Pteropus vampyrus ENSPVAG00000005316 ortholog_one2one 1 retrogene
retro_pvam_522,
Sorex araneus ENSSARG00000002463 ortholog_one2one 1 retrogene
retro_sara_624,
Sarcophilus harrisii ENSSHAG00000015128 ortholog_one2many 1 retrogene
retro_shar_830,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2091 99.30 77.52
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000014160 retrocopies