Parental gene: | Snx1, ENSRNOG00000017029 |
| Aliases: | None |
| Description: | Sorting nexin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q99N27] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 8:71414977..71453464(-) |
>ENSRNOG00000017029
ATGGCGTCGGGAGGTGGTGGCTGTAGCGCTTCGGAGCGACTCCCTCCGCCCTTCCCTGGAATGGATCCGGAGTCCGAAGG
GGCTGCCGGGGGGTCAGAACCCGAGGCTGGGGACAGCGACACCGAGGGGGAGGATATTTTCACTGGCGCCGCGGCAGCTA
GTAAGCCCCAGTCTCCAAAGAAAACCACATCCCTTTTTCCTATCAAAAATGGTTCCAAAGAAAATGGGATCCATGAAGAA
CAAGACCAAGAGCCACAGGACCTCTTTGCAGATGCCACAGTGGAACTATCCCTGGACAGCACACAGAATAACCAGAAGAC
AATGCCAGGCAAAACACTTATTCCTCATCCTACGCAAGAAGCCACAAATTCTCCTAAGCCACAGCCAAGCTATGAAGAGC
TGGAGGAAGAAGAACAGGAGGATCAGTTTGATTTGACAGTTGGTATCACTGATCCTGAGAAGATCGGGGACGGTATGAAT
GCCTATGTAGCCTACAAAGTCACCACACAGACAAGCTTACCGATGTTCAGAAGTAGGCAGTTTGCAGTGAAAAGAAGATT
CAGTGACTTTCTGGGTCTTTATGAGAAGCTCTCAGAGAAGCACTCCCAGAATGGTTTCATTGTCCCTCCTCCACCTGAGA
AGAGCCTAATAGGAATGACAAAGGTGAAGGTTGGGAAGGAAGATTCTTCTTCTGCAGAGTTTCTTGAGAAACGGAGGGCT
GCTTTGGAAAGGTACCTTCAAAGAATTGTGAATCATCCTACCATGTTACAGGACCCAGATGTCAGGGAGTTTTTAGAAAA
AGAAGAGCTGCCTCGAGCTGTAGGTACGCAGGCTCTAAGTGGTGCTGGTCTCCTTAAGATGTTCAACAAAGCTACAGATG
CAGTCAGCAAAATGACCATCAAGATGAATGAATCAGACATTTGGTTCGAGGAGAAGCTCCAGGAGGTGGAGTGTGAGGAA
CAGCGCCTACGGAAGCTGCACGCTGTGGTGGAGACTCTAGTCAACCATAGGAAAGAACTAGCACTGAATACAGCCCTGTT
TGCCAAGAGTCTAGCCATGCTTGGCAGCTCCGAGGACAACACAGCACTGTCTCGAGCACTCTCCCAACTGGCTGAGGTGG
AAGAAAAGATTGAGCAGCTCCACCAGGAACAGGCCAACAATGACTTCTTCCTCCTGGCTGAACTCCTGAGTGACTATATC
CGCCTCCTGGCCATTGTCCGAGCCGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCTCAAGCCACGCT
GCAGAAGAAGCGGGAGTCTGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGACAAACTGCAGCAGGCTAAGGATGAGATTA
CAGAGTGGGAATCTCGGGTGACTCAGTATGAAAGGGACTTTGAAAGGATTTCAACAGTTGTCCGAAAGGAGGTGACACGA
TTTGAGAAAGAGAAATCCAAGGACTTCAAAAACCACGTGATCAAGTACCTGGAGACACTCCTGCATTCCCAGCAGCAGCT
GGCAAAATACTGGGAAGCCTTCCTTCCTGAGGCCAGGGCCATCTCCTGA
ATGGCGTCGGGAGGTGGTGGCTGTAGCGCTTCGGAGCGACTCCCTCCGCCCTTCCCTGGAATGGATCCGGAGTCCGAAGG
GGCTGCCGGGGGGTCAGAACCCGAGGCTGGGGACAGCGACACCGAGGGGGAGGATATTTTCACTGGCGCCGCGGCAGCTA
GTAAGCCCCAGTCTCCAAAGAAAACCACATCCCTTTTTCCTATCAAAAATGGTTCCAAAGAAAATGGGATCCATGAAGAA
CAAGACCAAGAGCCACAGGACCTCTTTGCAGATGCCACAGTGGAACTATCCCTGGACAGCACACAGAATAACCAGAAGAC
AATGCCAGGCAAAACACTTATTCCTCATCCTACGCAAGAAGCCACAAATTCTCCTAAGCCACAGCCAAGCTATGAAGAGC
TGGAGGAAGAAGAACAGGAGGATCAGTTTGATTTGACAGTTGGTATCACTGATCCTGAGAAGATCGGGGACGGTATGAAT
GCCTATGTAGCCTACAAAGTCACCACACAGACAAGCTTACCGATGTTCAGAAGTAGGCAGTTTGCAGTGAAAAGAAGATT
CAGTGACTTTCTGGGTCTTTATGAGAAGCTCTCAGAGAAGCACTCCCAGAATGGTTTCATTGTCCCTCCTCCACCTGAGA
AGAGCCTAATAGGAATGACAAAGGTGAAGGTTGGGAAGGAAGATTCTTCTTCTGCAGAGTTTCTTGAGAAACGGAGGGCT
GCTTTGGAAAGGTACCTTCAAAGAATTGTGAATCATCCTACCATGTTACAGGACCCAGATGTCAGGGAGTTTTTAGAAAA
AGAAGAGCTGCCTCGAGCTGTAGGTACGCAGGCTCTAAGTGGTGCTGGTCTCCTTAAGATGTTCAACAAAGCTACAGATG
CAGTCAGCAAAATGACCATCAAGATGAATGAATCAGACATTTGGTTCGAGGAGAAGCTCCAGGAGGTGGAGTGTGAGGAA
CAGCGCCTACGGAAGCTGCACGCTGTGGTGGAGACTCTAGTCAACCATAGGAAAGAACTAGCACTGAATACAGCCCTGTT
TGCCAAGAGTCTAGCCATGCTTGGCAGCTCCGAGGACAACACAGCACTGTCTCGAGCACTCTCCCAACTGGCTGAGGTGG
AAGAAAAGATTGAGCAGCTCCACCAGGAACAGGCCAACAATGACTTCTTCCTCCTGGCTGAACTCCTGAGTGACTATATC
CGCCTCCTGGCCATTGTCCGAGCCGCCTTCGACCAGCGCATGAAGACATGGCAGCGCTGGCAGGATGCTCAAGCCACGCT
GCAGAAGAAGCGGGAGTCTGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGACAAACTGCAGCAGGCTAAGGATGAGATTA
CAGAGTGGGAATCTCGGGTGACTCAGTATGAAAGGGACTTTGAAAGGATTTCAACAGTTGTCCGAAAGGAGGTGACACGA
TTTGAGAAAGAGAAATCCAAGGACTTCAAAAACCACGTGATCAAGTACCTGGAGACACTCCTGCATTCCCAGCAGCAGCT
GGCAAAATACTGGGAAGCCTTCCTTCCTGAGGCCAGGGCCATCTCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 7 .06 RPM |
| SRP017611_kidney | 31 .54 RPM |
| SRP017611_brain | 20 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000707 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_791 | 99.53 | 81.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000017029 retrocopies