Parental gene:

Psme1, ENSRNOG00000019041

Aliases:None
Description:proteasome activator complex subunit 1 [Source:RefSeq peptide;Acc:NP_058960]
Organism:Rat (Rattus norvegicus)
Coordinates:15:38146265..38149140(+)


>ENSRNOG00000019041
ATGGCTACACTGAGGGTCCATCCTGAAGCCCAAGCCAAGGTGGATGTGTTTCGTGAGGACCTGTGTAGTAAGACAGAGAA
CCTGCTTGGGAGCTATTTTCCCAAGAAGATCTCAGAGTTGGATGCCTTCTTAAAGGAGCCAGCTCTCAACGAAGCCAACC
TGAGCAATCTGAAGGCTCCATTGGACATCCCAGTCCCTGATCCCGTCAAGGAGAAAGAGAAGGAGGAGCGGAAGAAGCAA
CAGGAGAAGGAAGAGAAGGACGAAAAGAAGAAAGGGGACGAAGACGACAAAGGTCCTCCCTGTGGTCCAGTGAACTGCAA
TGAGAAGATTGTGGTCCTCCTGCAACGCCTAAAGCCCGAGATCAAGGATGTCATTGAGCAACTCAACCTGGTTACTACCT
GGTTGCAGCTACAGATACCTCGGATAGAGGATGGGAATAATTTTGGCGTGGCTGTCCAGGAAAAGGTGTTTGAGCTGATG
ACCAGCCTTCATACCAAGCTGGAAGGCTTCCAAACGCAGATCTCTAAGTACTTCTCCGAGAGGGGTGATGCCGTGGCCAA
AGCAGCCAAGCAGCCTCATGTGGGTGATTATCGGCAGCTGGTGCATGAGCTGGACGAGGCGGAATACCAGGAGATCCGGC
TGATGGTCATGGAGATCCGTAACGCTTATGCTGTGTTATATGACATCATCCTGAAGAACTTTGAGAAGCTCAAGAAGCCC
CGTGGAGAGACAAAGGGGATGATCTATTGA

Library Parental gene expression (RPM)
SRP017611_brain 20 .63 RPM
SRP017611_kidney 100 .49 RPM
SRP017611_liver 89 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016433 ortholog_many2many 1 retrogene
retro_amel_637,
Bos taurus ENSBTAG00000021395 ortholog_one2many 1 retrogene
retro_btau_1189,
Canis familiaris ENSCAFG00000011924 ortholog_one2many 1 retrogene
retro_cfam_246,
Equus caballus ENSECAG00000016855 ortholog_one2many 1 retrogene
retro_ecab_1001,
Felis catus ENSFCAG00000005583 ortholog_many2many 1 retrogene
retro_fcat_1567,
Macropus eugenii ENSMEUG00000014712 ortholog_one2many 1 retrogene
retro_meug_1052,
Mus musculus ENSMUSG00000022216 ortholog_one2many 1 retrogene
retro_mmus_466,
Tursiops truncatus ENSTTRG00000008620 ortholog_one2many 1 retrogene
retro_ttru_569,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_50 93.57 100.00
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Download FASTA sequences of all ENSRNOG00000019041 retrocopies