Parental gene: | Eif3e, ENSRNOG00000027690 |
| Aliases: | Eif3e, Eif3s6 |
| Description: | Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:Q641X8] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 13:105112073..105144805(+) |
>ENSRNOG00000027690
ATGGCGGAGTACGACTTGACTACTCGCATCGCGCATTTTCTGGATCGACACCTGGTCTTTCCGCTTCTTGAGTTTCTCTC
TGTGAAAGAGATTTATAATGAGAAAGAATTATTACAAGGAAAATTGGATCTTCTTAGTGATACCAATATGGTGGACTTTG
CTATGGATGTTTACAAAAACCTTTATTCCGATGATATTCCCCATGCTCTGAGAGAAAAAAGAACCACAGTTGTTGCACAG
CTGAAACAACTCCAGGCAGAAACAGAGCCAATTGTGAAGATGTTTGAAGATCCAGAAACTACAAGGCAGATGCAGTCAAC
CAGGGATGGCCGGATGTTGTTTGACTACCTGGCAGACAAGCATGGGTTTAGGCAGGAGTACTTAGATACGCTCTACAGAT
ACGCAAAATTCCAATATGAGTGTGGAAATTACTCTGGAGCAGCAGAGTATCTTTACTTCTTTAGAGTTTTGGTTCCAGCA
ACAGATAGAAATGCTTTAAGTTCACTCTGGGGAAAACTGGCCTCTGAAATATTAATGCAGAATTGGGATGCAGCCATGGA
AGACCTTACTCGATTAAAAGAGACCATAGACAATAATTCTGTGAGTTCTCCACTCCAGTCTCTTCAACAGCGAACATGGC
TCATTCACTGGTCTCTGTTTGTTTTTTTCAACCATCCAAAAGGCCGTGATAATATTATTGATCTCTTCCTTTACCAACCA
CAGTACCTTAATGCAATTCAGACAATGTGTCCACATATTCTCCGCTATTTGACCACTGCCGTCATAACCAACAAAGATGT
GCGGAAACGCCGGCAGGTGCTGAAAGACCTAGTGAAAGTTATTCAACAGGAGTCTTACACATATAAAGACCCAATTACAG
AATTTGTTGAATGCCTATATGTTAACTTTGATTTTGATGGAGCTCAGAAAAAGCTAAGAGAATGTGAATCAGTGCTTGTG
AATGACTTCTTCCTGGTAGCATGTCTTGAGGACTTCATTGAGAATGCCCGTCTCTTCATATTTGAGACTTTCTGTCGTAT
CCACCAGTGTATCAGCATTAATATGCTAGCAGATAAACTGAATATGACTCCAGAAGAAGCTGAAAGATGGATTGTGAATT
TGATTAGAAATGCGAGGTTGGATGCCAAGATTGATTCTAAACTAGGTCATGTGGTAATGGGCAACAATGCAGTCTCACCC
TACCAGCAAGTGATTGAAAAGACTAAAAGTCTTTCTTTTAGAAGCCAAATGTTGGCCATGAATATCGAAAAGAAACTTAA
TCAGAACAGTAGATCAGAGGCTCCCAACTGGGCAACCCAAGATTCTGGCTTCTATTAA
ATGGCGGAGTACGACTTGACTACTCGCATCGCGCATTTTCTGGATCGACACCTGGTCTTTCCGCTTCTTGAGTTTCTCTC
TGTGAAAGAGATTTATAATGAGAAAGAATTATTACAAGGAAAATTGGATCTTCTTAGTGATACCAATATGGTGGACTTTG
CTATGGATGTTTACAAAAACCTTTATTCCGATGATATTCCCCATGCTCTGAGAGAAAAAAGAACCACAGTTGTTGCACAG
CTGAAACAACTCCAGGCAGAAACAGAGCCAATTGTGAAGATGTTTGAAGATCCAGAAACTACAAGGCAGATGCAGTCAAC
CAGGGATGGCCGGATGTTGTTTGACTACCTGGCAGACAAGCATGGGTTTAGGCAGGAGTACTTAGATACGCTCTACAGAT
ACGCAAAATTCCAATATGAGTGTGGAAATTACTCTGGAGCAGCAGAGTATCTTTACTTCTTTAGAGTTTTGGTTCCAGCA
ACAGATAGAAATGCTTTAAGTTCACTCTGGGGAAAACTGGCCTCTGAAATATTAATGCAGAATTGGGATGCAGCCATGGA
AGACCTTACTCGATTAAAAGAGACCATAGACAATAATTCTGTGAGTTCTCCACTCCAGTCTCTTCAACAGCGAACATGGC
TCATTCACTGGTCTCTGTTTGTTTTTTTCAACCATCCAAAAGGCCGTGATAATATTATTGATCTCTTCCTTTACCAACCA
CAGTACCTTAATGCAATTCAGACAATGTGTCCACATATTCTCCGCTATTTGACCACTGCCGTCATAACCAACAAAGATGT
GCGGAAACGCCGGCAGGTGCTGAAAGACCTAGTGAAAGTTATTCAACAGGAGTCTTACACATATAAAGACCCAATTACAG
AATTTGTTGAATGCCTATATGTTAACTTTGATTTTGATGGAGCTCAGAAAAAGCTAAGAGAATGTGAATCAGTGCTTGTG
AATGACTTCTTCCTGGTAGCATGTCTTGAGGACTTCATTGAGAATGCCCGTCTCTTCATATTTGAGACTTTCTGTCGTAT
CCACCAGTGTATCAGCATTAATATGCTAGCAGATAAACTGAATATGACTCCAGAAGAAGCTGAAAGATGGATTGTGAATT
TGATTAGAAATGCGAGGTTGGATGCCAAGATTGATTCTAAACTAGGTCATGTGGTAATGGGCAACAATGCAGTCTCACCC
TACCAGCAAGTGATTGAAAAGACTAAAAGTCTTTCTTTTAGAAGCCAAATGTTGGCCATGAATATCGAAAAGAAACTTAA
TCAGAACAGTAGATCAGAGGCTCCCAACTGGGCAACCCAAGATTCTGGCTTCTATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 21 .45 RPM |
| SRP017611_kidney | 39 .15 RPM |
| SRP017611_brain | 25 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000006702 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000000702 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000006458 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000000236 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000013105 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000003665 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000104408 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000022955 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000007269 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011359 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000005924 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000022336 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004120 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008050 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000020505 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000008976 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000011025 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_583 | 99.10 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_584 | 99.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1133 | 84.48 | 51.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_2879 | 84.48 | 51.91 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000027690 retrocopies