Parental gene:

NME6, ENSSSCG00000011347

Aliases:None
Description:NME/NM23 nucleoside diphosphate kinase 6 [Source:HGNC Symbol;Acc:20567]
Organism:Pig (Sus scrofa)
Coordinates:13:34294968..34298953(-)


>ENSSSCG00000011347
ATGACTTCGATCTTGCGGAGCCCTCAGGCACTCCAGCTCACTCTGGCACTGATAAAGCCTGATGCAGTTGCTCACCCACT
GATTCTAGAGGCTATTCATCAGCAGATTCTGAGCAACAAGTTCCTTATTGTACGAATGAGAGAACTTCTGTGGAGAAAAG
AAGATTGCCAGAAGTTTTATCAAGAGCATGAAGGACGTTTTTTCTATCAGCGGCTGGTAGAATTCATGGCCAGCGGGCCA
ATCCGAGCCTACATCCTTGCCCACAAAGATGCCATCCAGCTCTGGAGGACAGTGATGGGACCCACCAGAGTGTTTCGAGC
ACGCCACATAGCCCCAGATTCAATTCGTGGGAGTTTTGGCCTCACTGACACCCGTAATACAACCCATGGCTCTGATTCTG
TGGTTTCAGCCAGTAGAGAGATTGCAGCCTTCTTCCCTGACTTCAGTGAACAGCGATGGTATGAGGAAGAGGAGCCCCAG
TTGCGATGTGGGCCTGTGCACTACAGTCCAGAGGGAGGCATCCACTGTGCAGCTGGAACAGGAGGCCCAGGGCCAGCCTG
A

Library Parental gene expression (RPM)
SRP014902_placenta 20 .71 RPM
SRP014902_testis 19 .24 RPM
SRP018856_adipose 33 .83 RPM
SRP018288_kidney 22 .95 RPM
SRP018288_lung 12 .93 RPM
SRP018288_liver 20 .47 RPM
SRP018288_heart 7 .78 RPM
SRP035408_liver 36 .67 RPM
SRP035408_brain 7 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Mus musculus ENSMUSG00000032478 ortholog_one2one 1 retrogene
retro_mmus_2376,
Sus scrofa ENSSSCG00000007986 other_paralog 2 retrogenes
retro_sscr_1113, retro_sscr_852,
Sus scrofa ENSSSCG00000017591 other_paralog 1 retrogene
retro_sscr_854,
Ictidomys tridecemlineatus ENSSTOG00000002690 ortholog_one2one 1 retrogene
retro_itri_675,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_1076 71.81 98.92
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Download FASTA sequences of all ENSSSCG00000011347 retrocopies