Parental gene: | METAP1D, ENSSSCG00000015951 |
| Aliases: | None |
| Description: | methionyl aminopeptidase type 1D (mitochondrial) [Source:HGNC Symbol;Acc:32583] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 15:87589950..87608773(+) |
>ENSSSCG00000015951
GTAGGCTTTTTTAAGATGTGTTTATTTCTGCTCCTAGGTTGTCATAGGATTTTCTCTTCACCACTCAATCATATCTACTT
ACACAAGCAGTCCAGCAGTCAACAAAGAAGAAATTTCTTTTTCCGGAGACAAAGAGAGATTTCACACAGTATAGTTTTGC
CGGCTGCAGTTTCTTCAGCTCATCCAGTCCCTAAGCACATAAAGAAGCCAGACTATGTGACGACAGGCATTGTACCCGAC
TGGGGAGACAGCATAGAAGTTAAGACTGAAGATCAGATTCAAGGGCTTCATCAGGCTTGTCAGCTGGCCCGTCATGTCCT
CCTCCTGGCCGGGAAGAGTTTAAAGGTTGGCATGACAACAGAAGAGATAGATGCTCTTGTTCATCAGGAGATCATCAGTC
ATGATGCCTATCCTTCACCTCTAGGCTATGGAGGTTTTCCAAAATCTGTTTGTACCTCTGTAAACAATGTGCTTTGTCAT
GGTATTCCTGACAGTCGACCTCTTCAGGATGGAGATATTATCAACATTGATGTCACGGTTTACTACAATGGCTACCATGG
AGACACCTCTGAAACATTTTTGGTGGGCAGTGTGGATGAAGGCGGTAAAAAGTTAGTGGAGGTTGCCAGGAGGTGTAGAG
ATGAAGCAATTGCTGCTTGCAGAGCAGGGGCTCCCTTCTCTGTAATTGGAAACACAATCAGCCAGATAAGTCACCAGAAT
GGTTTGCAAGTCTGTCCACATTTTGTGGGACATGGAATAGGCTCTTACTTTCATGGACATCCAGAAATCTGGCATCATGC
AAATGACAGCGATCTGCTCATGGAGGAGGGTATGGCGTTCACCATAGAGCCAATTATAACCGAGGGATCCCAGGTGCTCG
CGTTCTGCCGGGTTGCATTTAAATGGTTTGGGAAGGGAAGGCTCGTCCGTCGACGCGGGTCTGCCCAGTTCGAGCACACA
GTTCTCATTACGTCCAGGGGCGTGCGGATACTGACCAAACTGCCCCACGAGGCCTGA
GTAGGCTTTTTTAAGATGTGTTTATTTCTGCTCCTAGGTTGTCATAGGATTTTCTCTTCACCACTCAATCATATCTACTT
ACACAAGCAGTCCAGCAGTCAACAAAGAAGAAATTTCTTTTTCCGGAGACAAAGAGAGATTTCACACAGTATAGTTTTGC
CGGCTGCAGTTTCTTCAGCTCATCCAGTCCCTAAGCACATAAAGAAGCCAGACTATGTGACGACAGGCATTGTACCCGAC
TGGGGAGACAGCATAGAAGTTAAGACTGAAGATCAGATTCAAGGGCTTCATCAGGCTTGTCAGCTGGCCCGTCATGTCCT
CCTCCTGGCCGGGAAGAGTTTAAAGGTTGGCATGACAACAGAAGAGATAGATGCTCTTGTTCATCAGGAGATCATCAGTC
ATGATGCCTATCCTTCACCTCTAGGCTATGGAGGTTTTCCAAAATCTGTTTGTACCTCTGTAAACAATGTGCTTTGTCAT
GGTATTCCTGACAGTCGACCTCTTCAGGATGGAGATATTATCAACATTGATGTCACGGTTTACTACAATGGCTACCATGG
AGACACCTCTGAAACATTTTTGGTGGGCAGTGTGGATGAAGGCGGTAAAAAGTTAGTGGAGGTTGCCAGGAGGTGTAGAG
ATGAAGCAATTGCTGCTTGCAGAGCAGGGGCTCCCTTCTCTGTAATTGGAAACACAATCAGCCAGATAAGTCACCAGAAT
GGTTTGCAAGTCTGTCCACATTTTGTGGGACATGGAATAGGCTCTTACTTTCATGGACATCCAGAAATCTGGCATCATGC
AAATGACAGCGATCTGCTCATGGAGGAGGGTATGGCGTTCACCATAGAGCCAATTATAACCGAGGGATCCCAGGTGCTCG
CGTTCTGCCGGGTTGCATTTAAATGGTTTGGGAAGGGAAGGCTCGTCCGTCGACGCGGGTCTGCCCAGTTCGAGCACACA
GTTCTCATTACGTCCAGGGGCGTGCGGATACTGACCAAACTGCCCCACGAGGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 0 .93 RPM |
| SRP014902_testis | 17 .40 RPM |
| SRP018856_adipose | 6 .37 RPM |
| SRP018288_kidney | 12 .61 RPM |
| SRP018288_lung | 3 .16 RPM |
| SRP018288_liver | 5 .76 RPM |
| SRP018288_heart | 16 .14 RPM |
| SRP035408_liver | 8 .34 RPM |
| SRP035408_brain | 12 .77 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_324 | 65.57 | 69.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000015951 retrocopies