Parental gene: | FAM91A1, ENSSSCG00000024424 |
| Aliases: | None |
| Description: | family with sequence similarity 91, member A1 [Source:HGNC Symbol;Acc:26306] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 4:16359634..16400990(-) |
>ENSSSCG00000024424
ATGAACATAGACGTGGAGTTCCACATCCGGCACAACTACCCGTGGAGCAAGCTGCCGGCCAACGTGAGGCAGAGTCTTGG
AAATTCACAGAGAGAGTATGAGAAGCAAGTTGTCCTGTACAGTATCCGCAATCAGTTACGATACAGAAATAACTTAGTGA
AACATGTCAAGAAGGATGAACGCAAGTACTATGAGGAGCTGTTGAGGTACAGTCGCGATCATCTCATGCTGTACCCTTAC
CACTTATCGGATATCATGGTAAAGGGCCTGAGGATAACACCGTTTTCCTATTACACTGGGATTATGGAGGACATTATGAA
CAGTGAGAAGAGTTATGATTCATTGCCGAATTTTACTGCTGCTGACTGCCTAAGGCTTCTTGGCATAGGAAGAAACCAGT
ACATTGATCTGATGAATCAGTGTAGATCATCCAAAAAATTTTTCAGAAGGAAAACGGCCCGTGATCTTTTACCAGTAAAG
CCAGTGGAAATTGCCATAGAGGCGTGGTGGGTGGTACAGGCTGGATATATCACAGAAGATGACATAAAGATATGTACTTT
GCCCGAGAAATGCGCTATCGATAAGATCATCGATGCAGGCCCTCAGCTCTCTGGATCACTAGATTACAATGTAGTACATA
GTTTATATAATAAAGGATTTATTTATCTGGATGTACCAATATCTGATGACAGTTGTATAGCGGTTCCTCCCCTTGAAGGT
TTTGTTATGAATCGAGTGCAAGGTGATTATTTTGAAACTCTACTCTATAAGATATTTGTTTCAATAGATGAGCATACTAA
TGTTGCAGAGCTTGCAAATGTCCTTGAGATAGACCTATCCCTAGTTAAGAATGCTGTGTCAATGTACTGCAGATTGGGAT
TTGCCCATAAGAAGGGACAAGTAATAAATTTGGATCAACTTCATTCATCGTGGAAGAATGTACCATCTGTAAACAGATTA
AAGAGTACTTTAGATCCACAAAAGATGCTCCTTTCGTGGGATGGCGGGGAAAGTAGGAGTCCTGTACAAGAAGCTTCATC
GGCTACTGACACCGATACAAATAGTCAAGAAGATGCAGCTGACACAGCCAGTTTAAGCAGTTTGAGCTTGTCTACAGGAT
ATACAAAGCGTATCGCATTCCTTTTTGACTCAACTCTTACTGCCTTTTTAATGATGGGAAATCTTTCACCAAACTTGAAA
AGCCATGCAGTCACAATGTTTGAAGTCGGCAAACTCTCAGATGAGTCTCTGGACAGCTTTCTTATAGAACTAGAAAAGGT
GCAGAGCACCGGTGAAGGAGAAGCACAGAGATATTTTGATCATGCACTTACTCTGAGAAACACAATATTGTTTCTGCGTC
ATAATAAAGATCTAGTTGCACAAACTGCACAGCCAGACCAGCCCAATTACGGTTTTCCTCTGGATCTCTTGCGCTGTGAA
AGCCTTCTGGGTTTGGACCCTGCAACTTGCAGCAGAGTTCTAAACAAAAATTACACCCTGCTTGTTTCCATGGCTCCTCT
TACCAACGAAATCCGGCCTGTCAGCAGCTGCACACCTCAGCATATTGGACCAGCAATCCCAGAAGTCAGTTCTGTCTGGT
TTAAGCTGTACATTTACCACATCACCAGGCAGGGACCACCTTCTCTTTTACTGTCCAAAGGTACAAGACTTCGAAAACTG
CCAGACATATTCCAGGGTTACGATCGATTACTAATAACGTCGTGGGGTCATGATCCTGGGGTGGTTCCTACATCGAATGT
GCTCACAATGTTGAATGATGCTTTAACACATTCGGCCGTTCTGATTCAGGGGCATGGTCTGCATGGGATAGGAGAGACTG
TCCACATACCTTTCCCATTTGACGAGACAGAACTCCAAGGAGAGTTTACTCGTGTCAATATGGGTGTCCATAAAGCACTG
CAAATACTAAGGAGCAAAGTGGACTTGCAGCATTTTTGTGGATATGTCACCATGTTGAATGCTTCCAGCCAGCTTGCAAA
CAGAAAACTCAGTGATGCTTCTGATGAGAGAGGAGAACCTGATTTGGCTTCTGGCTCAGATGTAAATGGGAGTACGGAGT
CATTTGAAATGGTCATTGAGGAAGCAGCTGTAGATTCAGCCACAAAGCAAAACTCTGTTGCCACAACAGAAGCAGATTGG
GTTCCTCTCGAGCTGTGCTTTGGAATTCCACTATTTAGTTCTGAATTAAATCAGAAAGTTTGCAGAAAGATTGCTACTCA
TGGCCTTTGCAGGAAAGAGAGCCTTCAAAACCTCTTACATTCCAGTAGAAAACTATCTCTACAAGTCCTTAACTTTGTTC
ACTCATTCCAGGAAAGTGCTTCACCACTGGATATCCACACTGAGGCCAGTTTTTCAGGTTTGCTTTCACAGTCATCCTGT
GCCGACGTGGGAGTTCCACTTCCTGCAAAGAACTTAATATTTAAAGATGGCATCTTAACAGAATGGAGTGGACGGTCGCC
TTCCTCGCTTCTCCTTGCTAATCTCCATATGCAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 23 .10 RPM |
| SRP014902_testis | 44 .13 RPM |
| SRP018288_heart | 34 .16 RPM |
| SRP018288_kidney | 69 .05 RPM |
| SRP018288_liver | 62 .36 RPM |
| SRP018288_lung | 64 .97 RPM |
| SRP018856_adipose | 31 .16 RPM |
| SRP035408_brain | 15 .02 RPM |
| SRP035408_liver | 17 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000176853 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005385 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004376 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_470 | 91.43 | 53.94 | Please wait, loading  |
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| 2. | retro_sscr_507 | 91.43 | 53.94 | Please wait, loading |
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Download FASTA sequences of all ENSSSCG00000024424 retrocopies