Parental gene: | LCLAT1, ENSSSCG00000025901 |
| Aliases: | None |
| Description: | Sus scrofa lysocardiolipin acyltransferase 1 (LCLAT1), mRNA. [Source:RefSeq mRNA;Acc:NM_001142845] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 3:115371532..115541170(+) |
>ENSSSCG00000025901
ATGGTGTCATGGAGAGGGATTTACTTTATACTCACTTTGTTTTGGGGAAGCTTTTTTGGAAGCATTTTCATGCTGGGTCC
TTTTTTACCTTTGATGTTTATAAATCCGTCTTGGTATCGCTGGATCAACAACCGCCTTGTGGCCACCTGGCTCACGCTAC
CTGTGGCATTGCTGGAAACCATGTTTGGTGTAAAAGTGATTATAACAGGTGATGCGTTTGTTCCTGGAGAAAGAAGTGTC
ATTATCATGAATCATCGGACAAGAATGGACTGGATGTTCCTGTGGAATTGTCTGATGAGATATAGCTACCTCAGATTAGA
GAAAATTTGCCTCAAAGCCAGTCTCAAAAGTGTTCCTGGATTTGGTTGGGCCATGCAGGCTGCTGCCTATATCTTCATTC
AGAGGAAATGGAAGGATGACAAGAGCCATTTTGAAGACATGATTGATTATTTTTGTAACATCCATGAACCACTTCAACTG
CTCATATTCCCAGAAGGGACTGATCTCACAGAAAATAGCACGGCTCGAAGTAATGAATTTGCTGAAAAGAATGGACTTCA
GAAATATGAGTATGTCTTACATCCAAGAACTACAGGCTTTACTTTTGTCGTAGACCGTCTAAGAGAAGGTAAGAACCTGG
ATGCTGTCCACGACATCACGGTGGCATACCCTCACAACATTCCTCAAACAGAGAGGCACCTCCTCCTCGGGGACTTTCCC
AAGGAGATCCACTTCCACGTCCACCGATACCCAGTGGCCTCCCTCCCCGCGTCCAAGGAGGACCTCCAGCTCTGGTGCCA
CAAGCGGTGGGAGGAGAAGGAAGCGAGGCTGCGCTCCTTCTATCGAGGGGAGAAGAATTTTGCCTTTACGGGACAGACTG
TGATTCCACCTTGCAAGTCTGAGCTCAGGGTCCTTGTGGTCAAGTGGCTGTCTATACTGTACTGGACCCTGTTCAGCCCT
GCAATGTGCCTGCTCATCTATTTCTACAGTCTCGCTCGGTGGTATTTTATAATCATCATTGTCATCCTCGTGCTGCAGGA
GAGACTATTTGGTGGACTGGAGCTCATCGAACTTGCATGTTACCGGTTTTTACACAAACAGCCACATTTAAATGCGAAGA
AAAATGAGTAA
ATGGTGTCATGGAGAGGGATTTACTTTATACTCACTTTGTTTTGGGGAAGCTTTTTTGGAAGCATTTTCATGCTGGGTCC
TTTTTTACCTTTGATGTTTATAAATCCGTCTTGGTATCGCTGGATCAACAACCGCCTTGTGGCCACCTGGCTCACGCTAC
CTGTGGCATTGCTGGAAACCATGTTTGGTGTAAAAGTGATTATAACAGGTGATGCGTTTGTTCCTGGAGAAAGAAGTGTC
ATTATCATGAATCATCGGACAAGAATGGACTGGATGTTCCTGTGGAATTGTCTGATGAGATATAGCTACCTCAGATTAGA
GAAAATTTGCCTCAAAGCCAGTCTCAAAAGTGTTCCTGGATTTGGTTGGGCCATGCAGGCTGCTGCCTATATCTTCATTC
AGAGGAAATGGAAGGATGACAAGAGCCATTTTGAAGACATGATTGATTATTTTTGTAACATCCATGAACCACTTCAACTG
CTCATATTCCCAGAAGGGACTGATCTCACAGAAAATAGCACGGCTCGAAGTAATGAATTTGCTGAAAAGAATGGACTTCA
GAAATATGAGTATGTCTTACATCCAAGAACTACAGGCTTTACTTTTGTCGTAGACCGTCTAAGAGAAGGTAAGAACCTGG
ATGCTGTCCACGACATCACGGTGGCATACCCTCACAACATTCCTCAAACAGAGAGGCACCTCCTCCTCGGGGACTTTCCC
AAGGAGATCCACTTCCACGTCCACCGATACCCAGTGGCCTCCCTCCCCGCGTCCAAGGAGGACCTCCAGCTCTGGTGCCA
CAAGCGGTGGGAGGAGAAGGAAGCGAGGCTGCGCTCCTTCTATCGAGGGGAGAAGAATTTTGCCTTTACGGGACAGACTG
TGATTCCACCTTGCAAGTCTGAGCTCAGGGTCCTTGTGGTCAAGTGGCTGTCTATACTGTACTGGACCCTGTTCAGCCCT
GCAATGTGCCTGCTCATCTATTTCTACAGTCTCGCTCGGTGGTATTTTATAATCATCATTGTCATCCTCGTGCTGCAGGA
GAGACTATTTGGTGGACTGGAGCTCATCGAACTTGCATGTTACCGGTTTTTACACAAACAGCCACATTTAAATGCGAAGA
AAAATGAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 5 .04 RPM |
| SRP014902_testis | 4 .24 RPM |
| SRP018856_adipose | 0 .60 RPM |
| SRP018288_kidney | 4 .14 RPM |
| SRP018288_lung | 5 .09 RPM |
| SRP018288_liver | 6 .72 RPM |
| SRP018288_heart | 9 .19 RPM |
| SRP035408_liver | 1 .47 RPM |
| SRP035408_brain | 0 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Tursiops truncatus | ENSTTRG00000013682 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_459 | 68.83 | 60.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000025901 retrocopies