Parental gene: | CLAUDIN1, ENSSSCG00000028484 |
| Aliases: | None |
| Description: | Sus scrofa claudin 1 (CLDN1), mRNA. [Source:RefSeq mRNA;Acc:NM_001244539] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 13:136971661..136987446(-) |
>ENSSSCG00000028484
ATGGCCAACGCGGGGCTGCAGCTGCTGGGCTTCATCCTGGCCTTCCTGGGCTGGATCGGCTCCATCGTCAGCACCGCACT
GCCTCAGTGGAAGATTTACTCCTACGCTGGTGACAACATTGTGACGGCCCAGGCCATCTACGAGGGGCTGTGGATGTCCT
GCGTGTCGCAGAGCACCGGGCAGATCCAGTGCAAAGTCTTCGACTCCTTGCTGAATCTGAACAGCACTTTGCAAGCAACC
CGTGCCTTGATGGTAATTGGCATCCTGCTGGGACTAATAGCCATCTTTGTGGCCACTGTTGGCATGAAGTGTATGAAGTG
CATGGAAGATGATGAGGTGCAGAAGATGCGGATGGCTGTCATTGGGGGAGTGATCTTTCTTATTTCAGGTCTGGCTATCT
TAGTTGCCACAGCATGGTATGGTAACAGAATTGTTCAAGAATTCTATGACCCCATGACCCCAGTCAATGCCAGATATGAA
TTTGGTCAGGCTCTCTTCACTGGCTGGGCTGCTGCTTCTCTCTGCCTTCTGGGAGGTGCCCTACTTTGCTGCTCCTGTCC
CCGAAAAACAACATCTTACCCAACACCAAGGCCCTATCCAAAACCTTCGCCTTCCAGTGGGAAAGACTACGTGTGA
ATGGCCAACGCGGGGCTGCAGCTGCTGGGCTTCATCCTGGCCTTCCTGGGCTGGATCGGCTCCATCGTCAGCACCGCACT
GCCTCAGTGGAAGATTTACTCCTACGCTGGTGACAACATTGTGACGGCCCAGGCCATCTACGAGGGGCTGTGGATGTCCT
GCGTGTCGCAGAGCACCGGGCAGATCCAGTGCAAAGTCTTCGACTCCTTGCTGAATCTGAACAGCACTTTGCAAGCAACC
CGTGCCTTGATGGTAATTGGCATCCTGCTGGGACTAATAGCCATCTTTGTGGCCACTGTTGGCATGAAGTGTATGAAGTG
CATGGAAGATGATGAGGTGCAGAAGATGCGGATGGCTGTCATTGGGGGAGTGATCTTTCTTATTTCAGGTCTGGCTATCT
TAGTTGCCACAGCATGGTATGGTAACAGAATTGTTCAAGAATTCTATGACCCCATGACCCCAGTCAATGCCAGATATGAA
TTTGGTCAGGCTCTCTTCACTGGCTGGGCTGCTGCTTCTCTCTGCCTTCTGGGAGGTGCCCTACTTTGCTGCTCCTGTCC
CCGAAAAACAACATCTTACCCAACACCAAGGCCCTATCCAAAACCTTCGCCTTCCAGTGGGAAAGACTACGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 122 .78 RPM |
| SRP014902_testis | 0 .14 RPM |
| SRP018856_adipose | 1 .41 RPM |
| SRP018288_kidney | 8 .18 RPM |
| SRP018288_lung | 3 .46 RPM |
| SRP018288_liver | 57 .09 RPM |
| SRP018288_heart | 0 .34 RPM |
| SRP035408_liver | 14 .50 RPM |
| SRP035408_brain | 0 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000021074 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_1006 | 82.94 | 99.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000028484 retrocopies