Parental gene: | SEH1L, ENSSSCG00000030252 |
| Aliases: | None |
| Description: | SEH1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:30379] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 6:90192179..90207246(-) |
>ENSSSCG00000030252
GTCTGGGACAAAAGTGAAAGTGGGGATTGGCATTGCACTGCTAGCTGGAAGACACATAGTGGATCCGTGTGGCGTGTGAC
GTGGGCCCATCCTGAATTTGGCCAGGTTTTGGCTTCCTGTTCCTTTGACCGAACAGCTGCTGTTTGGGAAGAAATAGTAG
GAGAATCAAATGATAAACTGCGAGGACAGAGCCACTGGGTGAAGAGGACAACGCTAGTGGACAGTAGGACATCTGTTACT
GATGTAAAGTTTGCTCCTAAGCATATGGGTCTTATGTTAGCCACCTGCTCAGCAGACGGTATAGTAAGAATATATGAGGC
ACCAGATGTCATGAACCTCAGCCAGTGGTCTCTGCAGCATGAGGTTTCCTGCAAGCTAAGCTGCAGTTGCATTTCTTGGA
ACCCTTCAAGCTCTCGAGCTCACCCCCCCATGATCGCAGTGGGCAGTGATGATGGTAGTCCTAATGCAATGGCCAAGGTG
CAGATTTTCGAATATAATGAGAACACCAGGAAATATGCCAAAGCCGAAACTCTCATGACAGTCACAGATCCTGTCCATGA
CATTGCTTTTGCTCCAAACTTGGGGAGGTCATTCCACATCCTAGCCATAGCAACCAAAGATGTGAGAATTTTTACACTGA
AGCCTGTGAGCAGGAAAGAACTTACTTCCTCCGGTGGGCCAACCAAATTTGAAATCCAGGTGGTGGCTCAGTTTGATAAT
CATAATTCCCAGGTCTGGAGAGTGAGCTGGAATATAACAGGGACAGTGCTGGCATCATCAGGAGACGATGGCTGTGTCCG
ACTGTGGAAAGCTAACTATATGGACAACTGGAAGTGCACTGGGATTCTGAAAGGTAACGGGAGCCCTGTCAGTGGGAGTT
CTCAGCAGGGAAACGCAAATCCTTCCCTAGGTTCAAATACCCCAAATCTGCAGCATTCACTAAATGGATCTTCTGCCAGC
AGAAAGCACAGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 4 .91 RPM |
| SRP014902_testis | 8 .06 RPM |
| SRP018288_heart | 9 .98 RPM |
| SRP018288_kidney | 8 .96 RPM |
| SRP018288_liver | 8 .32 RPM |
| SRP018288_lung | 12 .73 RPM |
| SRP018856_adipose | 17 .10 RPM |
| SRP035408_brain | 3 .94 RPM |
| SRP035408_liver | 5 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000545 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000006858 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_178 | 85.63 | 100.00 | Please wait, loading  |
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| 2. | retro_sscr_186 | 85.63 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSSSCG00000030252 retrocopies