Parental gene:

RPL19, ENSSTOG00000011120

Aliases:None
Description:ribosomal protein L19 [Source:HGNC Symbol;Acc:10312]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393300.1:14471233..14476173(+)


>ENSSTOG00000011120
ATGCTCAGGCTTCAGAAGAGGCTTGCCTCCAGTGTCCTCCGCTGTGGCAAAAAGAAGGTCTGGTTGGACCCCAATGAGAC
CAATGAAATCGCCAATGCCAACTCTCGTCAGCAGATCCGGAAGCTGATCAAAGATGGGCTGATCATCCGAAAACCAGTGA
CTGTCCATTCCCGGGCTCGATGCCGGAAAAATACTTTGGCTCGCCGGAAGGGCAGGCATATGGGCATAGGTAAGCGAAAG
GGTACAGCTAATGCTCGAATGCCGGAGAAGGTGACCTGGATGAGGAGGATGCGGATTCTGCGTAGGCTACTGAGGAGATA
CCGTGAATCTAAGAAGATTGACCGCCATATGTATCACAGCCTCTACCTGAAGGTAAAGGGGAATGTGTTCAAAAACAAGC
GGATCCTCATGGAACACATCCATAAGCTGAAGGCAGATAAGGCCCGCAAGAAGCTCCTGGCTGACCAGGCTGAAGCCCGC
AGGTCTAAGACCAAGGAGGCTCGCAAGCGCCGTGAGGAGCGCCTCCAGGCCAAGAAGGAGGAGATCATCAAGACTCTGTC
CAAGGAGGAAGAGACCAAGAAATAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000008520 possible_ortholog 4 retrogenes
retro_cjac_131, retro_cjac_220, retro_cjac_32, retro_cjac_64,
Equus caballus ENSECAG00000025080 ortholog_one2one 6 retrogenes
retro_ecab_104, retro_ecab_319, retro_ecab_351, retro_ecab_456, retro_ecab_497, retro_ecab_905,
Myotis lucifugus ENSMLUG00000012555 ortholog_one2one 11 retrogenes
retro_mluc_1149, retro_mluc_1473, retro_mluc_1694, retro_mluc_2032, retro_mluc_2034, retro_mluc_2398, retro_mluc_2400, retro_mluc_2616, retro_mluc_573, retro_mluc_887, retro_mluc_890,
Macaca mulatta ENSMMUG00000004235 ortholog_one2one 2 retrogenes
retro_mmul_283, retro_mmul_63,
Nomascus leucogenys ENSNLEG00000000748 possible_ortholog 19 retrogenes
retro_nleu_1182, retro_nleu_1570, retro_nleu_1602, retro_nleu_1620, retro_nleu_1889, retro_nleu_2171, retro_nleu_2236, retro_nleu_2284, retro_nleu_2335, retro_nleu_2430, retro_nleu_2446, retro_nleu_2538, retro_nleu_2695, retro_nleu_2702, retro_nleu_2735, retro_nleu_3116, retro_nleu_479, retro_nleu_540, retro_nleu_656,
Pongo abelii ENSPPYG00000008492 possible_ortholog 20 retrogenes
retro_pabe_1546, retro_pabe_1687, retro_pabe_1709, retro_pabe_1815, retro_pabe_2177, retro_pabe_2300, retro_pabe_2320, retro_pabe_2496, retro_pabe_2625, retro_pabe_2799, retro_pabe_2800, retro_pabe_3166, retro_pabe_3278, retro_pabe_3299, retro_pabe_3513, retro_pabe_3635, retro_pabe_3829, retro_pabe_4, retro_pabe_973, retro_pabe_980,
Rattus norvegicus ENSRNOG00000004741 possible_ortholog 37 retrogenes
retro_rnor_1029, retro_rnor_1039, retro_rnor_1295, retro_rnor_1338, retro_rnor_1405, retro_rnor_1440, retro_rnor_1449, retro_rnor_1478, retro_rnor_1512, retro_rnor_1525, retro_rnor_1558, retro_rnor_1577, retro_rnor_1765, retro_rnor_1766, retro_rnor_1795, retro_rnor_1814, retro_rnor_1860, retro_rnor_1885, retro_rnor_1905, retro_rnor_1907, retro_rnor_1970, retro_rnor_1981, retro_rnor_208, retro_rnor_2169, retro_rnor_2522, retro_rnor_2536, retro_rnor_2708, retro_rnor_2773, retro_rnor_2783, retro_rnor_2921, retro_rnor_2943, retro_rnor_326, retro_rnor_426, retro_rnor_434, retro_rnor_464, retro_rnor_465, retro_rnor_829,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_178 64.91 86.60
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2. retro_itri_200 71.72 100.00
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3. retro_itri_1174 70.27 56.70
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4. retro_itri_1180 60.34 59.28
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5. retro_itri_1330 69.39 100.00
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Download FASTA sequences of all ENSSTOG00000011120 retrocopies