Parental gene: | RPA1, ENSSTOG00000022475 |
| Aliases: | None |
| Description: | replication protein A1, 70kDa [Source:HGNC Symbol;Acc:10289] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393348.1:7972667..7994867(+) |
>ENSSTOG00000022475
CAAGGGCAGCAGCAAGTAGTTCCTTCCCCTGTCTCAGCAGTCAGTGCACCAACCAGCAAGCCCCAGCAACAGAATGGGAG
CTCGGGAGTGGGTTCTACTGCATCTAAGGCTTTTGGTGCTCCAAAGACATTTGGAAAACCTGGAGGAACCAGCCTATCAT
ATCCTTCTGGGGGGACGCAGTCCAAAGTGGTACCCATTGCCAGCCTCACCCCTTACCAGTCCAAGTGGACTATTTGTGCT
CGTGTTACCAACAAAAGTCAGATCCGTACCTGGAGCAATTCTCGAGGAGAAGGGAAACTTTTCTCTATAGAACTGGTTGA
TGAAAGTGGTGAAATCAGAGCTACTGCATTCAATGAACAAGTGGACAAGTTCTTTCCCCTTATTGAAGTTAACAAGGTGT
ATTATTTCTCAAAAGGCACCCTGAAGATTGCTAACAAACAATTCTCTGCTGTTAAAAATGACTATGAAATGACTTTCAAT
AATGAGACTTCTGTCATGCCTTGTGAAGATGATCATCATTTACCTACGGTTCAGTTTGATTTCACAGGGATTGGTGACTT
AGAGAATAAGCCTAAAGACTCACTTGTAGACATAATTGGGATCTGCAAGAGCTATGAAGATGCTACTAAAATCACAGTAA
AGTCAACCAACAGAGAAGTTTCTAAAAGAAATATCTATTTAATGGACATGTCAGGGAAAGTGGTGAATGCTACTCTGTGG
GGAGAAGATGCTGACAAGTTTGATGGTTCTAGACAGCCCGTGATGGCCATTAAAGGAGCCAGAGTTTCCGATTTTGGTGG
ACGGAGCCTTTCCATATTGTCTTCAAGTACTATCATTGTGAATCCTGACATCCCAGAGGCCTATAAGCTTCGTGGATGGT
TTGACTCAGAAGGACAAGCCTTAGATGGTGTTTCCATCTCTGATCTGAAGAGTGGAGGAGTAGGAGGAAGCAACACCAAC
TGGAAAACCTTGTATGAGGTTAAATCAGAGAATCTGGGCCAAGGTGACAAGGCAGACTATTTTAGCTCTGTGGCAACAGT
GGTGTATCTTCGCAAAGAGAACTGTATGTACCAGGCTTGCCCAACTCAGGACTGCAATAAGAAAGTGATTGACCAACAAA
ATGGATTGTACCGCTGTGAAAAGTGCGACAGTGAATTTGCCAATTTTAAATACCGAATGATCTTGTCGGCAAATATTGCG
GATTTTCAAGAAAATCAGTGGGTGACTTGTTTCCAGGAGTCTGCTGAAGCTATCCTCGGACAAAATGCTGCTTATCTTGG
GGAATTAAAAGAGAAGGTTAGCCACATATTTTATTATAGCTGTAATTATTCTCATAACAATGAGACTTTTTTGCTGGTCA
AACTGGAGACCTACAATGATGAGTCTCGAATTAAGGCCACTGTGATGGACGTGAAGCCCGTGGACTACAGAGACTATGGC
AAAAGACTGATCATGAACATCAGGAGAAACGCG
CAAGGGCAGCAGCAAGTAGTTCCTTCCCCTGTCTCAGCAGTCAGTGCACCAACCAGCAAGCCCCAGCAACAGAATGGGAG
CTCGGGAGTGGGTTCTACTGCATCTAAGGCTTTTGGTGCTCCAAAGACATTTGGAAAACCTGGAGGAACCAGCCTATCAT
ATCCTTCTGGGGGGACGCAGTCCAAAGTGGTACCCATTGCCAGCCTCACCCCTTACCAGTCCAAGTGGACTATTTGTGCT
CGTGTTACCAACAAAAGTCAGATCCGTACCTGGAGCAATTCTCGAGGAGAAGGGAAACTTTTCTCTATAGAACTGGTTGA
TGAAAGTGGTGAAATCAGAGCTACTGCATTCAATGAACAAGTGGACAAGTTCTTTCCCCTTATTGAAGTTAACAAGGTGT
ATTATTTCTCAAAAGGCACCCTGAAGATTGCTAACAAACAATTCTCTGCTGTTAAAAATGACTATGAAATGACTTTCAAT
AATGAGACTTCTGTCATGCCTTGTGAAGATGATCATCATTTACCTACGGTTCAGTTTGATTTCACAGGGATTGGTGACTT
AGAGAATAAGCCTAAAGACTCACTTGTAGACATAATTGGGATCTGCAAGAGCTATGAAGATGCTACTAAAATCACAGTAA
AGTCAACCAACAGAGAAGTTTCTAAAAGAAATATCTATTTAATGGACATGTCAGGGAAAGTGGTGAATGCTACTCTGTGG
GGAGAAGATGCTGACAAGTTTGATGGTTCTAGACAGCCCGTGATGGCCATTAAAGGAGCCAGAGTTTCCGATTTTGGTGG
ACGGAGCCTTTCCATATTGTCTTCAAGTACTATCATTGTGAATCCTGACATCCCAGAGGCCTATAAGCTTCGTGGATGGT
TTGACTCAGAAGGACAAGCCTTAGATGGTGTTTCCATCTCTGATCTGAAGAGTGGAGGAGTAGGAGGAAGCAACACCAAC
TGGAAAACCTTGTATGAGGTTAAATCAGAGAATCTGGGCCAAGGTGACAAGGCAGACTATTTTAGCTCTGTGGCAACAGT
GGTGTATCTTCGCAAAGAGAACTGTATGTACCAGGCTTGCCCAACTCAGGACTGCAATAAGAAAGTGATTGACCAACAAA
ATGGATTGTACCGCTGTGAAAAGTGCGACAGTGAATTTGCCAATTTTAAATACCGAATGATCTTGTCGGCAAATATTGCG
GATTTTCAAGAAAATCAGTGGGTGACTTGTTTCCAGGAGTCTGCTGAAGCTATCCTCGGACAAAATGCTGCTTATCTTGG
GGAATTAAAAGAGAAGGTTAGCCACATATTTTATTATAGCTGTAATTATTCTCATAACAATGAGACTTTTTTGCTGGTCA
AACTGGAGACCTACAATGATGAGTCTCGAATTAAGGCCACTGTGATGGACGTGAAGCCCGTGGACTACAGAGACTATGGC
AAAAGACTGATCATGAACATCAGGAGAAACGCG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013540 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000003123 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_677 | 75.50 | 59.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000022475 retrocopies