Parental gene: | LRRC42, ENSSTOG00000022786 |
| Aliases: | None |
| Description: | leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:28792] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393332.1:7166870..7188769(-) |
>ENSSTOG00000022786
ATGTCTTACTACCTCAACTCAGAAAATCATCTGGACCCAGGACCCATCTACGTACGAGAAAATGGGCAACTGCACATGGT
GAATCTGGCTCTGGATGGTGTCAGGAGTGGTTTGCAAAAGCCAAGGCCATTCAGACTGTTTCCCAAAGGCTTTTCTGTGG
AGCTTTGCATGAACAGGGAAGATGATACTGCACAGAAAGAGAAGACTGATCATTTCATCTTCACATATACCCGAGAGGGG
AATCTTCGGTATTCCGCCAAATCCCTTTTCAGCCTCGTCCTGGGCTTCATCTCTGACAATGTTGATCACATTGATTCCCT
TATTGGCTTTCCTGAGCAGATTGCTGAAAAGCTGTTCTCTGCTGCTGAAGCCAGGCAGAAATTCACAGAGCCAGGTGCAG
GGCTTAGGGCTTTACAGAAATTCACTGAGGCCTATGGAAGTCTGGTGCTGTGCTCCCTGTGCTTGCGAAACAGGTATCTG
GTGATTTCAGAAAAACTTGAAGAGATTAAGTCTTTCCGGGAGCTGACTCGCCTGGACCTTTCCTGTTGTAAGCTTGGAGA
TGAGCATGAACTTCTAGAACATCTCACTAACGAGGCCCTGTCCAGTGTAACTCAGCTCCACCTGAAGGATAATTGTTTAT
CTGATGCTGGGGTGCGGAAAATGACAGCACCAGTTCGAGTGATGAAAAGAGGCCTTGAGAACCTAACACTGCTAGACTTA
TCTTGTAACCCTGACATCACAGATGCAGGAATTGGATACCTCCTTTCTTTTAAAAAATTAAACTGCTTAGATATTTCTGG
GACAGGGCTCAAGGACATCAATGCTGTCAAACAGAAGCTCCAGACCCACATAGGCCTTATTCACTCCAAAGTGCCTTTGA
AGGAATTTGATCATAGTAACTGCAAGACAGAGGGCTGGGCTGATCAGATTGTTCTGCAGTGGGAACGTGTGACGGTGGAG
GCCAAGAAACCCAGAAAAGTCCCCGAACCTCAAGAGGCAACTCAGTACTTTTATCGGAAGCGGGCTCTGATGGAAGCCTC
AAGGAAGTGTCCCCTGGCAGACTCCCACATGAACTCTTCTGGAAAACTCCAGTTCTATAAAGAGAAAGCCCCAGACTGCC
ATGGGCCATTGTTAAAACAGAGCCAAGAGTCAAAGAAGAGCAAGAAGAGAGCTTTTGAGGAGTCAGAGAAGGAACAGAGT
AATTCTTCACAGTCTTCAAAGCAAAAATATGTATGTCTTGCTGTGGAAGACTGGGACTTATTAAATTCCTACTGA
ATGTCTTACTACCTCAACTCAGAAAATCATCTGGACCCAGGACCCATCTACGTACGAGAAAATGGGCAACTGCACATGGT
GAATCTGGCTCTGGATGGTGTCAGGAGTGGTTTGCAAAAGCCAAGGCCATTCAGACTGTTTCCCAAAGGCTTTTCTGTGG
AGCTTTGCATGAACAGGGAAGATGATACTGCACAGAAAGAGAAGACTGATCATTTCATCTTCACATATACCCGAGAGGGG
AATCTTCGGTATTCCGCCAAATCCCTTTTCAGCCTCGTCCTGGGCTTCATCTCTGACAATGTTGATCACATTGATTCCCT
TATTGGCTTTCCTGAGCAGATTGCTGAAAAGCTGTTCTCTGCTGCTGAAGCCAGGCAGAAATTCACAGAGCCAGGTGCAG
GGCTTAGGGCTTTACAGAAATTCACTGAGGCCTATGGAAGTCTGGTGCTGTGCTCCCTGTGCTTGCGAAACAGGTATCTG
GTGATTTCAGAAAAACTTGAAGAGATTAAGTCTTTCCGGGAGCTGACTCGCCTGGACCTTTCCTGTTGTAAGCTTGGAGA
TGAGCATGAACTTCTAGAACATCTCACTAACGAGGCCCTGTCCAGTGTAACTCAGCTCCACCTGAAGGATAATTGTTTAT
CTGATGCTGGGGTGCGGAAAATGACAGCACCAGTTCGAGTGATGAAAAGAGGCCTTGAGAACCTAACACTGCTAGACTTA
TCTTGTAACCCTGACATCACAGATGCAGGAATTGGATACCTCCTTTCTTTTAAAAAATTAAACTGCTTAGATATTTCTGG
GACAGGGCTCAAGGACATCAATGCTGTCAAACAGAAGCTCCAGACCCACATAGGCCTTATTCACTCCAAAGTGCCTTTGA
AGGAATTTGATCATAGTAACTGCAAGACAGAGGGCTGGGCTGATCAGATTGTTCTGCAGTGGGAACGTGTGACGGTGGAG
GCCAAGAAACCCAGAAAAGTCCCCGAACCTCAAGAGGCAACTCAGTACTTTTATCGGAAGCGGGCTCTGATGGAAGCCTC
AAGGAAGTGTCCCCTGGCAGACTCCCACATGAACTCTTCTGGAAAACTCCAGTTCTATAAAGAGAAAGCCCCAGACTGCC
ATGGGCCATTGTTAAAACAGAGCCAAGAGTCAAAGAAGAGCAAGAAGAGAGCTTTTGAGGAGTCAGAGAAGGAACAGAGT
AATTCTTCACAGTCTTCAAAGCAAAAATATGTATGTCTTGCTGTGGAAGACTGGGACTTATTAAATTCCTACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000016552 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000005566 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1536 | 87.72 | 90.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000022786 retrocopies