Parental gene: | RNF128, ENSSTOG00000022922 |
| Aliases: | None |
| Description: | ring finger protein 128, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:21153] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393309.1:7952585..8013536(-) |
>ENSSTOG00000022922
ATGGGGCCGCCACCCGGGGCCGGGGTCTTCTGCCGTGGTGGCTGCGGCTCTTCCAGATTGCTGGCATGGTGCTTCCTACT
GGCTCTGAGTCCGCATGCCCCCGGCTCCCGGGGGGCCGAAGCAGTGTGGACCGCGTACCTCAACGTGTCCTGGCGGGTTC
CGCACACAGGAGTGAACCGCACCGTGTGGGAGCTGAGCGAAGAGGGCGTGTACGGCCAGGACTCGCCGCTGGAGCCTGTG
GCTGGGGTCCTGGTACCTCCCGACGGGCCCGGGGCGCTCAACGCCTGTAACCCGCACACGAATTTCACGGTGCCCACGGT
TTGGGGAAGCACCGTTCAAGTCTCTTGGTTGGCCCTCATCCAACGTGGTGGAGGCTGCACCTTCGCAGACAAGATCCATC
TGGCTTATGAGAGAGGGGCGTCTGGAGCTGTCATCTTTAACTTCCCGGGGACCCGCAATGAGGTCATCCCCATGTCTCAC
CCGGGTGCAGGAGACATTGTTGCAATCATGATTGGCAATCTGAAAGGAACAAAAATTCTACAGTCTATTCAAAAAGGCAT
ACAAGTAACAATGGTCATTGAAGTAGGAAAAAAACATGGCCCTTGGGTGAATCACTATTCAATTTTCTTTGTTTCTGTGT
CCTTTTTTATCATTACCGCAGCAACTGTGGGCTATTTTATCTTTTATTCTGCTCGAAGATTACGGAATGCAAGAGCTCAA
AGCAGGAAGCAGAGACAATTAAAGGCAGATGCTAAAAAAGCTATTGGAAGGCTTCAACTACGTACACTGAAACAAGGAGA
CAAGGAAATTGGTCCTGATGGAGATAGTTGTGCTGTGTGTATTGAATTATATAAACCAAATGATTTGGTGCGGATCTTAA
CCTGCAACCATATTTTCCATAAGACATGTGTTGACCCATGGCTGTTAGAACATAGGACTTGCCCCATGTGCAAATGTGAC
ATTCTCAAAGCTTTGGGAATTGAGGTGGATGTTGAAGATGGATCAGTTTCCTTACAAGTCCCTGTATCCAATGACGCATC
AAATAGTGCCTCTCCCCATGAAGAGGATAATCGTAGTGAGACTGCGTCATCTGGATATGCTTCAGTTCAAGGAACAGATG
AACCACCCCTGGAGGAACATGTGCAGTCAGCAAATGAAAATCTACAGCTGGTAAACCATGAAGCAAGTTCTGTGGCAGTG
GATGTAGTTCCTCATGTTGACAACCCAACCTTTGAAGAAGATGAAACTCCTGATCAAGAAACTGCTGTGCGAGAGATTAA
ATCATAA
ATGGGGCCGCCACCCGGGGCCGGGGTCTTCTGCCGTGGTGGCTGCGGCTCTTCCAGATTGCTGGCATGGTGCTTCCTACT
GGCTCTGAGTCCGCATGCCCCCGGCTCCCGGGGGGCCGAAGCAGTGTGGACCGCGTACCTCAACGTGTCCTGGCGGGTTC
CGCACACAGGAGTGAACCGCACCGTGTGGGAGCTGAGCGAAGAGGGCGTGTACGGCCAGGACTCGCCGCTGGAGCCTGTG
GCTGGGGTCCTGGTACCTCCCGACGGGCCCGGGGCGCTCAACGCCTGTAACCCGCACACGAATTTCACGGTGCCCACGGT
TTGGGGAAGCACCGTTCAAGTCTCTTGGTTGGCCCTCATCCAACGTGGTGGAGGCTGCACCTTCGCAGACAAGATCCATC
TGGCTTATGAGAGAGGGGCGTCTGGAGCTGTCATCTTTAACTTCCCGGGGACCCGCAATGAGGTCATCCCCATGTCTCAC
CCGGGTGCAGGAGACATTGTTGCAATCATGATTGGCAATCTGAAAGGAACAAAAATTCTACAGTCTATTCAAAAAGGCAT
ACAAGTAACAATGGTCATTGAAGTAGGAAAAAAACATGGCCCTTGGGTGAATCACTATTCAATTTTCTTTGTTTCTGTGT
CCTTTTTTATCATTACCGCAGCAACTGTGGGCTATTTTATCTTTTATTCTGCTCGAAGATTACGGAATGCAAGAGCTCAA
AGCAGGAAGCAGAGACAATTAAAGGCAGATGCTAAAAAAGCTATTGGAAGGCTTCAACTACGTACACTGAAACAAGGAGA
CAAGGAAATTGGTCCTGATGGAGATAGTTGTGCTGTGTGTATTGAATTATATAAACCAAATGATTTGGTGCGGATCTTAA
CCTGCAACCATATTTTCCATAAGACATGTGTTGACCCATGGCTGTTAGAACATAGGACTTGCCCCATGTGCAAATGTGAC
ATTCTCAAAGCTTTGGGAATTGAGGTGGATGTTGAAGATGGATCAGTTTCCTTACAAGTCCCTGTATCCAATGACGCATC
AAATAGTGCCTCTCCCCATGAAGAGGATAATCGTAGTGAGACTGCGTCATCTGGATATGCTTCAGTTCAAGGAACAGATG
AACCACCCCTGGAGGAACATGTGCAGTCAGCAAATGAAAATCTACAGCTGGTAAACCATGAAGCAAGTTCTGTGGCAGTG
GATGTAGTTCCTCATGTTGACAACCCAACCTTTGAAGAAGATGAAACTCCTGATCAAGAAACTGCTGTGCGAGAGATTAA
ATCATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000022920 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000002816 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000001567 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000003695 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012328 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000022151 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000012551 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000007536 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1254 | 56.89 | 52.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1255 | 57.14 | 57.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000022922 retrocopies