Parental gene:

TPM1, ENSTTRG00000003762

Aliases:None
Description:tropomyosin 1 (alpha) [Source:HGNC Symbol;Acc:12010]
Organism:Dolphin (Tursiops truncatus)
Coordinates:scaffold_96534:93703..121092(+)


>ENSTTRG00000003762
ATGGACGCCATCAAGAAGAAGATGCAGATGCTCAAGCTCGACAAGGAGAACGCCTTGGATCGAGCGGAGCAGGCGGAGGC
CGATAAGAAGGCGGCGGAGGACAGGAGCAAGCAGCTCGAGGAGGACATAGCGGCCAAGGAGAAGCTGCTGCGGGCGTCGG
AGGACGAGCGGGACCGGGTGCTGGAGGAGCTGCACAAGGCAGAGGACAGCCTCCTGGCCGCCGATGAGGCCGCCGCCAAG
CTGGAAGATGAGCTGGTGTCGCTGCAAAAGAAACTCAAGGGCACCGAAGATGAACTGGACAAATACTCCGAGGCTCTCAA
AGATGCCCAGGAGAAGCTGGAGCTGGCGGAGAAAAAGGCCACCGACGCTGAAGCCGACGTAGCTTCTCTGAACAGACGCA
TCCAGCTGGTTGAGGAAGAGTTGGATCGTGCCCAGGAGCGTCTGGCAACAGCTCTGCAGAAGCTGGAGGAGGCCGAGAAG
GCAGCAGATGAGAGTGAGAGAGGCATGAAAGTCATTGAAAGCCGAGCTCAAAAGGACGAGGAGAAAATGGAAATTCAGGA
GATCCAGCTGAAAGAGGCCAAGCACATCGCTGAGGATGCCGACCGCAAGTATGAAGAGGTGGCCCGTAAGCTGGTCATCA
TTGAGAGTGACCTGGAGCGTGCAGAGGAGCGGGCTGAGCTCTCAGAAGGCAAATGTGCCGAGCTTGAAGAAGAGTTGAAA
ACTGTGACGAACAACTTGAAGTCACTGGAGGCTCAGGCTGAGAAGTACTCGCAGAAGGAAGACAAATATGAGGAAGAGAT
CAAGGTCCTTTCTGACAAGCTGAAGGAGGCTGAGACTCGGGCCGAGTTTGCGGAGAGGTCAGTAACTAAATTGGAGAAAA
GCATTGATGACTTAGAAGAGAAAGTGGCTCATGCCAAAGAAGAAAACCTTAGTATGCACCAGATGCTGGATCAGACTTTA
CTGGAGTTAAACAACATGTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000016966 ortholog_one2one 1 retrogene
retro_cfam_2167,
Choloepus hoffmanni ENSCHOG00000012788 ortholog_one2one 11 retrogenes
retro_chof_1194, retro_chof_1272, retro_chof_1360, retro_chof_1789, retro_chof_1829, retro_chof_2309, retro_chof_346, retro_chof_399, retro_chof_412, retro_chof_770, retro_chof_967,
Callithrix jacchus ENSCJAG00000004355 ortholog_one2one 2 retrogenes
retro_cjac_2200, retro_cjac_691,
Macropus eugenii ENSMEUG00000014581 ortholog_one2one 2 retrogenes
retro_meug_1944, retro_meug_2161,
Pongo abelii ENSPPYG00000006534 ortholog_one2one 1 retrogene
retro_pabe_624,
Rattus norvegicus ENSRNOG00000018184 ortholog_one2one 1 retrogene
retro_rnor_734,
Ictidomys tridecemlineatus ENSSTOG00000009955 ortholog_one2many 1 retrogene
retro_itri_166,
Tursiops truncatus ENSTTRG00000014542 within_species_paralog 2 retrogenes
retro_ttru_504, retro_ttru_839,
Vicugna pacos ENSVPAG00000003277 ortholog_one2one 1 retrogene
retro_vpac_424,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_446 57.78 68.40
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSTTRG00000003762 retrocopies