Parental gene:

PPP1CC, ENSVPAG00000008411

Aliases:None
Description:protein phosphatase 1, catalytic subunit, gamma isozyme [Source:HGNC Symbol;Acc:9283]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_2878:571036..588699(-)


>ENSVPAG00000008411
ATGGCGGATATAGATAAACTCAACATCGACAGCATCATCCAACGGCTGCTGGAAGTGAGAGGGTCCAAGCCTGGTAAGAA
TGTCCAGCTACAGGAGAATGAAATCAGAGGACTGTGCTTAAAGTCCCGAGAGATCTTTCTCAGTCAGCCTATCCTACTAG
AACTTGAAGCACCACTCAAAATATGTGGTGATATCCACGGGCAGTACTATGATTTGCTTCGACTTTTTGAGTACGGTGGT
TTCCCGCCTGAAAGCAATTACCTGTTTCTTGGGGACTATGTGGACAGGGGAAAGCAGTCGTTGGAGACTATTTGCCTCTT
ACTGGCTTACAAAATCAAATATCCCGAGAATTTCTTTCTTCTCAGAGGAAACCATGAATGTGCCAGCATCAATAGAATTT
ATGGATTTTATGATGAATGTAAAAGAAGATATAACATTAAACTATGGAAAACTTTCACAGACTGCTTTAACTGTTTACCG
ATAGCAGCCATCGTGGATGAGAAAATATTCTGCTGTCATGGAGGTTTATCACCAGATCTTCAATCTATGGAGCAGATTCG
GCGAATTATGCGACCAACTGATGTACCAGATCAAGGTCTTCTTTGTGATCTTTTGTGGTCTGACCCCGATAAAGATGTCT
TAGGCTGGGGTGAAAATGACAGAGGAGTGTCCTTCACATTTGGTGCAGAAGTGGTTGCAAAATTTCTCCATAAGCATGAT
TTGGATCTTATATGTAGAGCCCATCAGGTGGTTGAAGATGGATATGAATTTTTTGCAAAGAGGCAGTTGGTCACTCTGTT
TTCTGCACCCAATTATTGTGGAGAGTTTGACAATGCAGGTGCCATGATGAGTGTGGACGAAACACTCATGTGTTCTTTTC
AGATTTTAAAGCCTGCAGAGAAAAAGAAGCCAAATGCCACGAGACCTGTAACACCTCCAAGGGTTACATCAGGCCTGAAC
CCGTCCATTCAGAAAGCTTCAAATTATAGGAACAATACTGTTCTATACGAGTGA

Species Parental gene accession Homology type Retrogenes number
Ciona intestinalis ENSCING00000004542 ortholog_one2many 1 retrogene
retro_cint_3,
Callithrix jacchus ENSCJAG00000009147 possible_ortholog 7 retrogenes
retro_cjac_1062, retro_cjac_1165, retro_cjac_1408, retro_cjac_2304, retro_cjac_2535, retro_cjac_3288, retro_cjac_822,
Dipodomys ordii ENSDORG00000010484 ortholog_one2one 2 retrogenes
retro_dord_260, retro_dord_261,
Echinops telfairi ENSETEG00000015721 possible_ortholog 1 retrogene
retro_etel_2065,
Sorex araneus ENSSARG00000000571 possible_ortholog 1 retrogene
retro_sara_700,
Drosophila melanogaster FBgn0003134 ortholog_one2many 5 retrogenes
retro_dmel_21, retro_dmel_37, retro_dmel_42, retro_dmel_48, retro_dmel_81,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_540 62.62 89.91
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Download FASTA sequences of all ENSVPAG00000008411 retrocopies