Parental gene: | bdh2, ENSXETG00000021320 |
| Aliases: | None |
| Description: | 3-hydroxybutyrate dehydrogenase, type 2 [Source:Jamboree;Acc:XB-GENE-985755] |
| Organism: | Xenopus (Xenopus tropicalis) |
| Coordinates: | GL172747.1:1189059..1197855(+) |
>ENSXETG00000021320
GTGAATGGGCATGACAGAGTTGTGACAGGTGTGGCACAGGGTATTGCTTTTAGCGGCACACTGAGGGCATTTGTCAATGA
AGGAGCTCAGGTCATTGCAACAGACATCAATGAAACAAAGCTAAAAGAACTGGAAGCTTATAAAGGTATTCAGACAAGAG
TTTTGGATGTCACTAAAAAGGATCAGATTGAAAAATTATGCAAAGAAATTGATAGAGTCGATGTTCTCTTCAATGTAGCT
GGGTTTGTGCACCATGGAACTATATTGGATTGTGCGGAGGCAGACTGGGATTTCACCATGAATGTAAATGTCCGTAGCAT
GTACCTTATGATTAAAACATTCTTGCCCAAAATGCTTGCTCAGAAATCAGGAAATATTATTAACATGTCTTCTGTGGCAT
CAAGCATTAAAGGTGTGGTGAACAGGTGTGTGTACAGTACATCAAAGGCAGCAGTCATTGGCCTGACCAAATCGGTTGCG
TCAGACTTCATTGAGCAAGGCATCAGATGTAACTGTATTTGTCCTGGGACGGTGGATACTCCATCTTTAAGGGAAAGGAT
TCAAGCAAGGCCAGATCCTGAACAGGCTTTTAAGGACTTTCTTGCACGACAAAGGACTGGCAGAATGGCTACTGCAGAAG
AAGTTGCCCATCTTTGTGTGTACCTGGCATCTGATGAACAACCTTACTGTAATGGGATTGGTGTTACTGACTTGCTTCTC
TCTCCTGCGTGGAATATA
GTGAATGGGCATGACAGAGTTGTGACAGGTGTGGCACAGGGTATTGCTTTTAGCGGCACACTGAGGGCATTTGTCAATGA
AGGAGCTCAGGTCATTGCAACAGACATCAATGAAACAAAGCTAAAAGAACTGGAAGCTTATAAAGGTATTCAGACAAGAG
TTTTGGATGTCACTAAAAAGGATCAGATTGAAAAATTATGCAAAGAAATTGATAGAGTCGATGTTCTCTTCAATGTAGCT
GGGTTTGTGCACCATGGAACTATATTGGATTGTGCGGAGGCAGACTGGGATTTCACCATGAATGTAAATGTCCGTAGCAT
GTACCTTATGATTAAAACATTCTTGCCCAAAATGCTTGCTCAGAAATCAGGAAATATTATTAACATGTCTTCTGTGGCAT
CAAGCATTAAAGGTGTGGTGAACAGGTGTGTGTACAGTACATCAAAGGCAGCAGTCATTGGCCTGACCAAATCGGTTGCG
TCAGACTTCATTGAGCAAGGCATCAGATGTAACTGTATTTGTCCTGGGACGGTGGATACTCCATCTTTAAGGGAAAGGAT
TCAAGCAAGGCCAGATCCTGAACAGGCTTTTAAGGACTTTCTTGCACGACAAAGGACTGGCAGAATGGCTACTGCAGAAG
AAGTTGCCCATCTTTGTGTGTACCTGGCATCTGATGAACAACCTTACTGTAATGGGATTGGTGTTACTGACTTGCTTCTC
TCTCCTGCGTGGAATATA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 25 .89 RPM |
| SRP007412_skeletal_muscle | 2 .22 RPM |
| SRP007412_heart | 11 .20 RPM |
| SRP007412_kidney | 11 .20 RPM |
| SRP007412_liver | 20 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000164039 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006381 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025868 | ortholog_one2one | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000007721 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_xtro_35 | 51.90 | 94.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_xtro_37 | 51.90 | 94.31 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSXETG00000021320 retrocopies