Parental gene: | sdha, ENSXETG00000023408 |
| Aliases: | None |
| Description: | succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:Jamboree;Acc:XB-GENE-956942] |
| Organism: | Xenopus (Xenopus tropicalis) |
| Coordinates: | GL173061.1:826152..870944(-) |
>ENSXETG00000023408
GTCTTTGGAATTGGATATGTCTTATTGTGTCTCATTGGAAAAAACTATGCGATAAGCGTTAATTGCACTGCAACTTGTAC
AGCAGCAACACGTAACTTTCACTTCTCAGTATATGGAAGAAAGGACACTTCAGCAAAACTTTCTGATTCGATCTCAACAC
AGTATCCTGTAGTTGATCATGACTTTGATGCAGTTGTTGTTGGTGCTGGTGGTGCTGGATTACGGGCTGCGTTTGGATTG
TCTGAAGCTGGCTTCAATACAGCTTGCATAACTAAGCTATTTCCTACCAGATCTCACACTGTTGCTGCACAGGGTGGAAT
TAATGCTGCGCTGGGTAATATGGAAGATGATGACTGGAGGTGGCACTTCTATGACACGGTTAAGGGTTCAGACTGGCTTG
GTGATCAAGATGCCATCCATTATATGACTGAGCAAGCACCAGCTTCTGTCATTGAGCTGGAAAATTACGGAATGCCTTTC
AGCAGAACTGAGCAGGGGAAAATCTACCAGCGTGCATTTGGAGGTCAGAGTCTTAAGTTTGGAAAAGGAGGACAGGCTCA
CCGTTGTTGCTGTGTGGCAGACAGAACAGGCCATTCCTTGCTGCACACTCTCTATGGAAGGTCTCTTCGGTATGATACCA
GTTATTTTGTGGAATACTTTGCCCTAGACCTTTTGATGGAAAATGGTGAATGCCGGGGTGTGATAGCCCTCTGTATGGAA
GATGGATCAATACATCGCTTCAGGGCCAAGAACACCGTGATAGCGACTGGGGGATACGGACGTACATTTTTCAGCTGTAC
CTCTGCTCATACCTGCACTGGAGATGGTACTGCAATGGTTACAAGAGCTGGGCTTCCATGCCAGGATTTAGAATTTGTGC
AGTTCCACCCTACAGGAATCTATGGGGCAGGATGTTTGATAACAGAAGGTTGTCGTGGAGAAGGAGGAATCCTTATCAAC
AGTGAAGGTGAAAGGTTTATGGAAAGATATGCTCCTGTAGCAAAGGATTTGGCTTCGCGAGATGTGGTTTCCCGTTCTAT
GACTATAGAAATTCGAGAAGGAAGAGGCTGTGGGAAGGACAAAGACCATGTTTATCTTCAGCTCCACCACCTTCCACCCA
GTCAGCTGGCATCCCGACTCCCAGGAATTTCTGAGACAGCAATGATCTTTGCAGGAGTTGATGTAACAAAGGAACCCATT
CCTGTCCTGCCAACAGTTCATTATAACATGGGGGGTATTCCTACCAATTATAAAGGGCAGGTAAAAAATAATAGGAATGT
GAGGGCACAGCTACTGGGTGTCATTTTTGTTATAGTTGGTAATACACTCTGCTGTGCTATTCATAGTATTGACAGGCTAG
AGNGAAGTGGGCTCTTGAACAATTTAGAGTTAGAAACTTGTATGTCCATTAACGATGCCTCTGGATGTTTATTATTAGGT
GAACCAGTGCCATCAATTAAGGAAAATGCAGGAGAGGAATCTGTTGCAAATCTGGACAAATTACGCTTTACCAATGGAAG
CACTAGGACTTCAGAACTCAGAATCAACATGCAGAAGACTATGCAGAATCATGCAGCAGTTTTCCGAACAGGTTCTGTGT
TGAAGGAAGGTTGTGAAAAACTGAGTGCCATCAATTCTACAATGGATGACATCAAGACATTTGACAGAGGCATTGTTTGG
AACACTGATTTAGTGGAGACACTAGAGCTGCAAAATTTAATGCTATGTGCACTGCAAACAATTTATGGTGCTGAGGCACG
CAAAGAGAGTCGTGGTGCCCATGAAACTAGTCATAACAACAAGGTAAGAATTGATGAGTATGATTATTCAAAGCCCATTC
AAGGTCAGCAGAAGAAAAGTTTTAGCGAGCACTGGAGGAAGCACACGCTATCTTATGTTGATGGGAAAGGAAAGGTTAGC
TTGGAATACAGACCTGTCATCGATACAACTTTAAATGAAGACTGTGTGTCTGTTCCACCGGCAATTCGTTCTTACTAA
GTCTTTGGAATTGGATATGTCTTATTGTGTCTCATTGGAAAAAACTATGCGATAAGCGTTAATTGCACTGCAACTTGTAC
AGCAGCAACACGTAACTTTCACTTCTCAGTATATGGAAGAAAGGACACTTCAGCAAAACTTTCTGATTCGATCTCAACAC
AGTATCCTGTAGTTGATCATGACTTTGATGCAGTTGTTGTTGGTGCTGGTGGTGCTGGATTACGGGCTGCGTTTGGATTG
TCTGAAGCTGGCTTCAATACAGCTTGCATAACTAAGCTATTTCCTACCAGATCTCACACTGTTGCTGCACAGGGTGGAAT
TAATGCTGCGCTGGGTAATATGGAAGATGATGACTGGAGGTGGCACTTCTATGACACGGTTAAGGGTTCAGACTGGCTTG
GTGATCAAGATGCCATCCATTATATGACTGAGCAAGCACCAGCTTCTGTCATTGAGCTGGAAAATTACGGAATGCCTTTC
AGCAGAACTGAGCAGGGGAAAATCTACCAGCGTGCATTTGGAGGTCAGAGTCTTAAGTTTGGAAAAGGAGGACAGGCTCA
CCGTTGTTGCTGTGTGGCAGACAGAACAGGCCATTCCTTGCTGCACACTCTCTATGGAAGGTCTCTTCGGTATGATACCA
GTTATTTTGTGGAATACTTTGCCCTAGACCTTTTGATGGAAAATGGTGAATGCCGGGGTGTGATAGCCCTCTGTATGGAA
GATGGATCAATACATCGCTTCAGGGCCAAGAACACCGTGATAGCGACTGGGGGATACGGACGTACATTTTTCAGCTGTAC
CTCTGCTCATACCTGCACTGGAGATGGTACTGCAATGGTTACAAGAGCTGGGCTTCCATGCCAGGATTTAGAATTTGTGC
AGTTCCACCCTACAGGAATCTATGGGGCAGGATGTTTGATAACAGAAGGTTGTCGTGGAGAAGGAGGAATCCTTATCAAC
AGTGAAGGTGAAAGGTTTATGGAAAGATATGCTCCTGTAGCAAAGGATTTGGCTTCGCGAGATGTGGTTTCCCGTTCTAT
GACTATAGAAATTCGAGAAGGAAGAGGCTGTGGGAAGGACAAAGACCATGTTTATCTTCAGCTCCACCACCTTCCACCCA
GTCAGCTGGCATCCCGACTCCCAGGAATTTCTGAGACAGCAATGATCTTTGCAGGAGTTGATGTAACAAAGGAACCCATT
CCTGTCCTGCCAACAGTTCATTATAACATGGGGGGTATTCCTACCAATTATAAAGGGCAGGTAAAAAATAATAGGAATGT
GAGGGCACAGCTACTGGGTGTCATTTTTGTTATAGTTGGTAATACACTCTGCTGTGCTATTCATAGTATTGACAGGCTAG
AGNGAAGTGGGCTCTTGAACAATTTAGAGTTAGAAACTTGTATGTCCATTAACGATGCCTCTGGATGTTTATTATTAGGT
GAACCAGTGCCATCAATTAAGGAAAATGCAGGAGAGGAATCTGTTGCAAATCTGGACAAATTACGCTTTACCAATGGAAG
CACTAGGACTTCAGAACTCAGAATCAACATGCAGAAGACTATGCAGAATCATGCAGCAGTTTTCCGAACAGGTTCTGTGT
TGAAGGAAGGTTGTGAAAAACTGAGTGCCATCAATTCTACAATGGATGACATCAAGACATTTGACAGAGGCATTGTTTGG
AACACTGATTTAGTGGAGACACTAGAGCTGCAAAATTTAATGCTATGTGCACTGCAAACAATTTATGGTGCTGAGGCACG
CAAAGAGAGTCGTGGTGCCCATGAAACTAGTCATAACAACAAGGTAAGAATTGATGAGTATGATTATTCAAAGCCCATTC
AAGGTCAGCAGAAGAAAAGTTTTAGCGAGCACTGGAGGAAGCACACGCTATCTTATGTTGATGGGAAAGGAAAGGTTAGC
TTGGAATACAGACCTGTCATCGATACAACTTTAAATGAAGACTGTGTGTCTGTTCCACCGGCAATTCGTTCTTACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 53 .38 RPM |
| SRP007412_skeletal_muscle | 286 .84 RPM |
| SRP007412_heart | 262 .62 RPM |
| SRP007412_kidney | 262 .62 RPM |
| SRP007412_liver | 24 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Nomascus leucogenys | ENSNLEG00000001292 | ortholog_one2many | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000010157 | ortholog_one2one | 1 retrogene | |
| Drosophila melanogaster | FBgn0261439 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_xtro_61 | 55.23 | 61.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSXETG00000023408 retrocopies