Parental gene: | KN540365.1_FG001 |
| Aliases: | None |
| Description: | None |
| Organism: | Longstamen rice (Oryza longistaminata) |
| Coordinates: | KN540365.1:49127..53382(-) |
>KN540365.1_FG001
ATGGCGGGTACGTGCTCGAGGACGTGCCGCATGTGTGCGACTACCTCCCCGATCTCCCGTCTTCGATTCTATTTCGCTGT
GATTATGATGGCCATTGTCTGTTGTTTGATGTTGCAGACATACTCAAATCCACTGCAAGATAACCCGGCTTACTCGGTTG
TGAAGCAATACTTTGTAAACCCAGATGACACTGTCTGCCAGAAGGCCATTGTTCATAAGGATGGCCCAAGAGGCAATCAC
TTCCGTCGTGCTGGGCCTCGACAGAGGGTGTTTTTTGAATCGGATGAGGTCCATGCATGCATTGTCACATGTGGAGGACT
GTGCCCTGGACTGAACACTGTCATTAGGGAAATTGGTGGGTATAGAGGTTTCTATGCTTGTAACACCATTGACTTGAGTC
CAAAGAGTGTAAACGACATTCACAAAAGGGGTGGAACTGTTCTTGGGACATCACGTGGAGGCCATGACACCATGAAGATT
GTTGACAGCATCCAGGATCGTGGTATAAATCAGGTTTATGTAATTGGTGGTGATGGTACTCAAAGGGGTGCAGGAGTGAT
TTTTGAAGAGATTAGAAGACGTGGTCTCAAGGTTGCTGTTGCTGGCATTCCAAAGACGATTGATAATGATATACCAGTAA
TTGACAGATCATTTGGTTTCGACACTGCAGTTGAGGAGGCCCAACGTGCAATAAATGCTGCTCATGTAGAAGCTGGAAGT
GCCGAGAATGGTATAGGCCTCGTAAAGCTAATGGGTCGACACAGTGGTTTCATTGCACACTATGCTACTCTAGCCAGCAG
AGACGTGGATTGTTGCTTGATTCCAGAGTCACCTTTCTATCTGGAAGGTGAAGGTGGCCTTTTTAGATATTTGGAAAAGC
GTCTGAAGGAGAATGGTCATATGGTTATCGTTGTTGCGGAGGGTGCAGGGCAGAAACTTATTAATGAAACAAAGGAATCA
ATGGGGAAAGATGCTTCAGGCAATTCGATTCTTCTTGATGTTGGTCTTTGGTTATCTCAAAAGATAAAAGAGCATTTCAA
GAAAATCAAGACAACTATAAATCTCAAGTATATAGATCCTACATACATGATACGTGCCATTCCTAGCAATGCGTCTGACA
ATGTGTATTGCACACTGTTGGCACACAGTGTGGTTCATGGAGCCATGGCTGGATACACTGGTTTCACTGTTGGCCAAGTA
AATGGTCGGCATTGCTATATCCCGTTTTACAGGATCACAGAGAAGCAGAACAAAGTTTCGATTACTGATAGGATGTGGGC
AAGACTTCTCTCCTCAACCAACCAGCCAAGTTTCCTCAGCAAGAAAGATGTGGAGGACGCAAAGATGGAAGAAGAGAGAG
CATCCAAGTTTTTCGATGGGCCGCCTCCCAACCCCAAGGTTGAAGACAAAGTCGCTTCCAATGGCAAGGCTGTGAAGTGA
ATGGCGGGTACGTGCTCGAGGACGTGCCGCATGTGTGCGACTACCTCCCCGATCTCCCGTCTTCGATTCTATTTCGCTGT
GATTATGATGGCCATTGTCTGTTGTTTGATGTTGCAGACATACTCAAATCCACTGCAAGATAACCCGGCTTACTCGGTTG
TGAAGCAATACTTTGTAAACCCAGATGACACTGTCTGCCAGAAGGCCATTGTTCATAAGGATGGCCCAAGAGGCAATCAC
TTCCGTCGTGCTGGGCCTCGACAGAGGGTGTTTTTTGAATCGGATGAGGTCCATGCATGCATTGTCACATGTGGAGGACT
GTGCCCTGGACTGAACACTGTCATTAGGGAAATTGGTGGGTATAGAGGTTTCTATGCTTGTAACACCATTGACTTGAGTC
CAAAGAGTGTAAACGACATTCACAAAAGGGGTGGAACTGTTCTTGGGACATCACGTGGAGGCCATGACACCATGAAGATT
GTTGACAGCATCCAGGATCGTGGTATAAATCAGGTTTATGTAATTGGTGGTGATGGTACTCAAAGGGGTGCAGGAGTGAT
TTTTGAAGAGATTAGAAGACGTGGTCTCAAGGTTGCTGTTGCTGGCATTCCAAAGACGATTGATAATGATATACCAGTAA
TTGACAGATCATTTGGTTTCGACACTGCAGTTGAGGAGGCCCAACGTGCAATAAATGCTGCTCATGTAGAAGCTGGAAGT
GCCGAGAATGGTATAGGCCTCGTAAAGCTAATGGGTCGACACAGTGGTTTCATTGCACACTATGCTACTCTAGCCAGCAG
AGACGTGGATTGTTGCTTGATTCCAGAGTCACCTTTCTATCTGGAAGGTGAAGGTGGCCTTTTTAGATATTTGGAAAAGC
GTCTGAAGGAGAATGGTCATATGGTTATCGTTGTTGCGGAGGGTGCAGGGCAGAAACTTATTAATGAAACAAAGGAATCA
ATGGGGAAAGATGCTTCAGGCAATTCGATTCTTCTTGATGTTGGTCTTTGGTTATCTCAAAAGATAAAAGAGCATTTCAA
GAAAATCAAGACAACTATAAATCTCAAGTATATAGATCCTACATACATGATACGTGCCATTCCTAGCAATGCGTCTGACA
ATGTGTATTGCACACTGTTGGCACACAGTGTGGTTCATGGAGCCATGGCTGGATACACTGGTTTCACTGTTGGCCAAGTA
AATGGTCGGCATTGCTATATCCCGTTTTACAGGATCACAGAGAAGCAGAACAAAGTTTCGATTACTGATAGGATGTGGGC
AAGACTTCTCTCCTCAACCAACCAGCCAAGTTTCCTCAGCAAGAAAGATGTGGAGGACGCAAAGATGGAAGAAGAGAGAG
CATCCAAGTTTTTCGATGGGCCGCCTCCCAACCCCAAGGTTGAAGACAAAGTCGCTTCCAATGGCAAGGCTGTGAAGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Arabidopsis lyrata | fgenesh2_kg.7__854__AT4G32840.1 | ortholog_many2many | 1 retrogene | |
| Solanum lycopersicum | Solyc07g045160.2 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_olon_23 | 60.23 | 54.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all KN540365.1_FG001 retrocopies