Parental gene:

OBART10G18180

Aliases:None
Description:None
Organism:Oryza barthii
Coordinates:10:18107564..18109976(+)


>OBART10G18180
ATGGGCTCGCTGTCCTCTCTCGCCGCCGCGGCGGTGTTTCTCTCCCTCCTCGCCGTCGGCCACTGCGCCGCCGCCGACTT
CAACGCCACCGACGCCGACGCCGACTTCGCCGGCAACGGCGTGGACTTCAACTCCAGCGACGCCGCCGTCTACTGGGGCC
CCTGGACCAAGGCCAGGGCCACCTGGTACGGCCAGCCCAACGGCGCCGGCCCCGACGACAACGGCGGCGCGTGCGGGTTC
AAGCACACCAACCAGTACCCGTTCATGTCGATGACCTCCTGCGGCAACCAGCCATTGTTCAAGGACGGCAAGGGATGCGG
CTCTTGCTACAAGATCAGATGCACCAAGGACAAGTCGTGCTCCGGCAGGTCGGAGACGGTGATCATCACCGACATGAACT
ACTACCCGGTGGCTCCGTTCCACTTCGACCTCAGCGGCACGGCGTTCGGCAGGCTCGCCAAGCCTGGCCTCAACGACAAG
CTGCGCCACTCCGGCATCATCGACATCGAGTTCACCAGGGTGCCATGCGAGTTCCCGGGGCTCAAGATCGGGTTCCACGT
GGAGGAGTACTCGAACCCTGTGTACTTCGCGGTGCTGGTGGAGTACGAGGACGGCGACGGCGACGTGGTGCAGGTGGACC
TGATGGAGTCGAAGACGGCGCACGGGCCGCCGACGGGGAGGTGGACGCCGATGAGGGAGTCGTGGGGCTCCATCTGGAGG
CTGGACACCAACCACAGGCTCCAGGCCCCCTTCTCCATCCGCATCCGCAACGAGTCCGGCAAGACGCTCGTCGCCAACAA
CGTCATCCCGGCCAACTGGAGGCCCAACACGTTCTACCGCTCCTTCGTCCAGTACAGCTGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA033426 ortholog_one2one 1 retrogene
retro_oind_67,
Zea mays GRMZM2G013002 ortholog_one2many 1 retrogene
retro_zmay_9,
Oryza longistaminata KN539761.1_FG003 ortholog_one2one 1 retrogene
retro_olon_5,
Leersia perrieri LPERR10G14060 ortholog_one2one 1 retrogene
retro_lper_25,
Oryza glumaepatula OGLUM10G18290 ortholog_one2one 1 retrogene
retro_oglu_25,
Oryza nivara ONIVA10G20720 ortholog_one2one 1 retrogene
retro_oniv_16,
Oryza glaberrima ORGLA10G0133100 ortholog_one2one 1 retrogene
retro_ogla_8,
Oryza rufipogon ORUFI10G19380 ortholog_one2one 1 retrogene
retro_oruf_30,
Oryza sativa japonica OS10G0556100 ortholog_one2one 1 retrogene
retro_osat_34,
Physcomitrella patens PP1S100_99V6 ortholog_many2many 1 retrogene
retro_ppat_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_obar_7 71.49 87.06
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Download FASTA sequences of all OBART10G18180 retrocopies