Parental gene:

PP1S100_99V6

Aliases:None
Description:None
Organism:Moss (Physcomitrella patens)
Coordinates:DS544989.1:500960..502996(+)


>PP1S100_99V6
ATGGGATCCTCAGTGGTTCTTCGCCAACCCACTGTGCTGCTGTGGATAGCCCTTGCGAGTGTGCTTCCAGTTGCTCACTG
CAGCGGCTCCCTGGAGGCCAGCGGGTACACCGCTTCCTGGCTCCCTGGACATGCAACTTGGTATGGGGATCCATATGGAG
AGGGCTCAAGCGGAGGAGCTTGTGGCTACACAGAGCTCGCAGGTACTCCGTATGGTTTGAGTGTGGGTGCGGGAAGTGCT
GTCATCTACCAGAATGGCCAAGGGTGCGGCGAATGCTACGAAGTTAAGTGCACGTACCCATCTTGCAAGCCGACGCCCAG
TAGAATTGTTATTACTGATTTTTGTCCAGGAGGAACGTTTTGCAGCACAGGCGAACCAGCATTTGATCTCAGTGGCATGG
CCATGACAAACATGGCTCTTCCTGGCAGGGACCAGGAGTTACGTAACTTGGGCTTGTACGAGATTCAATACAGAAGAGTG
CCCTGTTATTATCCAAACCAGAACGTCGCTTTTAAAGTAGACCCCGGGTCCACCCCGTTTTGGCTTTCGTTCACCATTGA
ATACCAAGGAGGACCAGGAGACATTGAAAGCGTCGCTATAAGACAGGCTGGTAGCTCTGAGTTCCAGCAGATGCAACACA
ACTGGGGTGCTAATTACATGTTAATCTGCTACTCCGGAAAGCCATTCAAGGGACCCTACGACGTGATGATCACTGCCAAA
TTGAACGGCCATGTCCTTATTGCCCAGGATGCCATTCCGGAATACTTCCAACCAGGAGGTATCTACGAGTCCAATGTGCA
GCTAGGGTACTAG

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA033426 ortholog_many2many 1 retrogene
retro_oind_67,
Zea mays GRMZM2G013002 ortholog_many2many 1 retrogene
retro_zmay_9,
Oryza longistaminata KN539761.1_FG003 ortholog_many2many 1 retrogene
retro_olon_5,
Leersia perrieri LPERR10G14060 ortholog_many2many 1 retrogene
retro_lper_25,
Oryza barthii OBART10G18180 ortholog_many2many 1 retrogene
retro_obar_7,
Oryza glumaepatula OGLUM10G18290 ortholog_many2many 1 retrogene
retro_oglu_25,
Oryza nivara ONIVA10G20720 ortholog_many2many 1 retrogene
retro_oniv_16,
Oryza glaberrima ORGLA10G0133100 ortholog_many2many 1 retrogene
retro_ogla_8,
Oryza rufipogon ORUFI10G18850 ortholog_many2many 1 retrogene
retro_oruf_14,
Oryza rufipogon ORUFI10G19380 ortholog_many2many 1 retrogene
retro_oruf_30,
Oryza sativa japonica OS10G0556100 ortholog_many2many 1 retrogene
retro_osat_34,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ppat_8 65.25 95.93
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all PP1S100_99V6 retrocopies