Parental gene:

OPUNC01G21870

Aliases:None
Description:None
Organism:Red rice (Oryza punctata)
Coordinates:1:25289507..25290850(-)


>OPUNC01G21870
ATGGCCGCCGGCGCCGACGGCGACACGGCTGCCGCCGCCGTGGTGGTGTTCGACTTCGACAGGACCATCATCGAGTGGGA
CAGCGACGACTGGGTCATCACCAAGCTCGGCGCCTCCGACGCCTTCCGCCGCCTCCACCCCACCATGCGCTGGAATCCCC
TCATGGACAGGATGATGGCGGAGCTGCACGCGCAGGGGAGGTCGGCCGACGACATCCGCGACTGCCTCAAGAGCGCCCCC
CTCGACGCCCACATCCTCTCCGCCATCACGACGGCCTCGGCATTAGGGTGTGATTTGAGGGTGGTGAGCGACGCCAACGC
CTTCTTCATCGAGACCGTGCTGGAGCACCACGGCGTCCTCGGATGCTTCTCGGAGATCAGCACGAACCCGGCCCGCGTCG
ACGGCGACGGCAGGCTGAGGATCTCGCCGTTCCATGACCCCGACAGCTCGCCCCATGGATGCAGCCTCTGCCCTGAGAAC
ATGTGCAAGGGCATTATTCAGATGAAGAGGGATATGGATAATAGAAATCTTGCATGGTCCCCCGGCAAGATAATTGAGAG
GATTCAGGCGACAGCCAATGGTAAAAGGCATTTCATCTACATTGGTGATGGCAGAGGAGATTACTGCCCCTCCCTTAAGC
TAGGGGAAGGGGACTATGTCATGCCAAAGGAAAACTACCCCCTCTGGAATCTCATCAGCAGCAACACACAGCTTCTCAAG
GCTGAGGTTCACCCATGGAATAATGGCGAAGAACTCGAACGAACCTTACTTAAGTTGGTCAACAAGCTGATCAGCCCACC
TGCACAAGCATCCCAATTTGAATGCAAATGTGATATGAGCAATCCAGTATCCACTGAAGTAGGACGCAATCAGGCTCTCC
GTGTGCCACATTAA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA001283 ortholog_one2one 1 retrogene
retro_oind_8,
Brachypodium distachyon BRADI2G42720 ortholog_one2one 1 retrogene
retro_bdis_19,
Zea mays GRMZM2G035134 ortholog_one2many 1 retrogene
retro_zmay_14,
Hordeum vulgare MLOC_52823 ortholog_one2one 1 retrogene
retro_hvul_27,
Oryza brachyantha OB01G31280 ortholog_one2one 1 retrogene
retro_obra_4,
Oryza glumaepatula OGLUM01G25430 ortholog_one2one 1 retrogene
retro_oglu_22,
Oryza meridionalis OMERI01G19970 ortholog_one2one 1 retrogene
retro_omer_22,
Oryza nivara ONIVA01G24910 ortholog_one2one 1 retrogene
retro_oniv_37,
Oryza rufipogon ORUFI01G24440 ortholog_one2one 1 retrogene
retro_oruf_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opun_7 61.15 51.85
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Download FASTA sequences of all OPUNC01G21870 retrocopies