Parental gene: | OPUNC02G08590 |
| Aliases: | None |
| Description: | None |
| Organism: | Red rice (Oryza punctata) |
| Coordinates: | 2:7100678..7108795(+) |
>OPUNC02G08590
ATGTGGCATCTGGGCAGCGGCTTCTCCTCCCCACTGAGCCCTCTTGTCCTCACTCGCAGGTGGTGGCCCTTGACCTTTCT
CTCTCTTCTTCTTCTACTCTGCTGCTGCTGCTACTTCCAGCCTCCAGGGAGGTGGGTGACTGAAGAACTGAAGATGTCGG
GTGCTGCTCTCGTTGCAATTGCGGCTTCCATCGGCAACCTGCTTCAGGGGTGGGACAATGCCACCATTGCAGGTGCTGTT
TTATACATAAAGAAGGAATTCAAGCTAGAAAGTGAACCCACTGTGGAGGGGCTAATCGTGGCCATGTCATTGATTGGTGC
AACCATCATCACAACATTCTCGGGGCCGGTATCAGACTGGATCGGCCGGCGCCCTATGCTCATCCTCTCTTCGATTCTGT
ACTTCCTCAGCAGTCTCATCATGCTATGGTCCCCGAATGTCTATGTGTTACTACTTGCGCGCCTTATAGACGGATTCGGC
ATCGGCTTGGCTGTCACACTTGTACCTTTGTACATCTCAGAGACAGCTCCTTCAGAAATCAGGGGGTTGCTGAATACACT
GCCACAGTTCAGTGGGTCAGGGGGCATGTTCTTGTCCTACTGCATGGTGTTTGGGATGTCACTGTTGCCATCACCTGACT
GGAGGATTATGCTTGGCGTTCTCGCAATCCCTTCATTGTTTTTCTTCGGATTGACAATATTCTATCTGCCAGAATCGCCA
AGATGGCTTGTCAGCAAGGGGCGGATGGCTGAGGCAAAGAAGGTGTTGCAAAAATTACGTGGGAGAGAGGATGTCTCAGG
AGAAATGGCTCTTCTTGTTGAAGGTTTGGAGGTTGGAGCTGACACTTCCATTGAAGAGTACATCATCGGACCGGCTACTG
AGCCAGCTGATGAACATGTCATTGATGGCGATAAGGACCAAATAACACTGTACGGGCCTGAAGAGGGCCAATCATGGATT
GCTCGACCTTCCAAGGGACCCAGCATTCTTGGAAGTGTGCTTTCTCTCACATCTCGTCATGGCAGCATGGTGAACCAGAG
CGTCCCGCTTATGGATCCTATCGTCACGCTTTTCGGCAGTGTCCATGAGAACATGCCTCATGCTGGAGGAAGCATGAGGA
GTACATTGTTTCCCAACTTTGGTAGTATGTTTAGTGTGACGGATCAGCACCCCAAGGTTGATCAATGGGATGAGGAAAAC
CTTCATAGGGATGATGAGGAATACGCGTCTGATGGAGCTGGAGGTGACTATGAAGACAATGTCCACAGCCCGTTGCTGTC
CCGACAGACCACGAGCGCAGAAGGGAAGGACATTGCACACCATGGTCACCGTGGAAGTGCTCTGAGTATGAGAAGAAGAA
GCCTCTTGGAAGAGGGTGGCGAGGCGGTGAGCAGTACTGGCATTGGTGGGGGATGGCAGCTTGCATGGAAATGGTCAGAG
CGAGAAGGTGAGGATGGTAAGAAGGAAGGAGGATTTAAAAGGATCTACTTGCACCAAGAGGGAGTGCCAGGATCAAGAAG
GGGCTCGGTTATTTCACTTCCTGGTGGAGGGGATGCTCCTGAAGGCAGTGAATTCATACATGCTGCCGCTTTGGTAAGCC
AACCAGCACTTTACTCCAAGGATATCATTGAACAGCGTATGTCCGGTCCAGCCATGATTCATCCATCAGAGGCAGCTGCC
AAAGGTTCAAGCTTGAAAGATTTATTTGAACCTGGAGTGAGGCGTGCGCTGTTAGTTGGTGTTGGAATTCAAATCCTTCA
ACAGTTTGCTGGAATAAATGGAGTTCTCTACTACACCCCTCAAATACTTGAGCAAGCTGGTGTGGCAGTTCTCCTTTCCA
ATCTTGGCCTCAGTTCAGCATCAGCATCCATCTTGATCAGTTCTCTCACCACCTTACTGATGCTTCCTAGCATTGGTTTA
GCCATGAGACTTATGGACATTTCTGGAAGAAGGTTTCTGCTCCTGGGCACAATTCCAGTCTTGATAGCATCTCTAGTTGT
CTTGGTTGTGTCCAATGTTATTGACTTGGGTACAGTGCCCCATGCCGCGCTCTCCACAATCAGCGTCATCATCTACTTCT
GCTGCTTCGTCATGGGATTTGGTCCGATCCCCAACATTCTGTGTGCGGAGATCTTCCCCACTAGGGTCCGCGGCATATGC
ATTGCCATCTGCGCCCTGACATTCTGGATTGGTGATATCATTGTCACCTACAGCCTCCCTGTAATGCTGAACGCCATCGG
CCTAGCAGGTGTCTTCGGTATATACGCAGTTGTTTGTTCCATTGCCTTCGTGTTCGTCTTCCTCAAGGTCCCCGAGACAA
AGGGCATGCCGCTCGAAGTCATCACCGAGTTCTTCGCTGTTGGCGCAAAGCAAATGCAGGCTGCAAAGGCCTAA
ATGTGGCATCTGGGCAGCGGCTTCTCCTCCCCACTGAGCCCTCTTGTCCTCACTCGCAGGTGGTGGCCCTTGACCTTTCT
CTCTCTTCTTCTTCTACTCTGCTGCTGCTGCTACTTCCAGCCTCCAGGGAGGTGGGTGACTGAAGAACTGAAGATGTCGG
GTGCTGCTCTCGTTGCAATTGCGGCTTCCATCGGCAACCTGCTTCAGGGGTGGGACAATGCCACCATTGCAGGTGCTGTT
TTATACATAAAGAAGGAATTCAAGCTAGAAAGTGAACCCACTGTGGAGGGGCTAATCGTGGCCATGTCATTGATTGGTGC
AACCATCATCACAACATTCTCGGGGCCGGTATCAGACTGGATCGGCCGGCGCCCTATGCTCATCCTCTCTTCGATTCTGT
ACTTCCTCAGCAGTCTCATCATGCTATGGTCCCCGAATGTCTATGTGTTACTACTTGCGCGCCTTATAGACGGATTCGGC
ATCGGCTTGGCTGTCACACTTGTACCTTTGTACATCTCAGAGACAGCTCCTTCAGAAATCAGGGGGTTGCTGAATACACT
GCCACAGTTCAGTGGGTCAGGGGGCATGTTCTTGTCCTACTGCATGGTGTTTGGGATGTCACTGTTGCCATCACCTGACT
GGAGGATTATGCTTGGCGTTCTCGCAATCCCTTCATTGTTTTTCTTCGGATTGACAATATTCTATCTGCCAGAATCGCCA
AGATGGCTTGTCAGCAAGGGGCGGATGGCTGAGGCAAAGAAGGTGTTGCAAAAATTACGTGGGAGAGAGGATGTCTCAGG
AGAAATGGCTCTTCTTGTTGAAGGTTTGGAGGTTGGAGCTGACACTTCCATTGAAGAGTACATCATCGGACCGGCTACTG
AGCCAGCTGATGAACATGTCATTGATGGCGATAAGGACCAAATAACACTGTACGGGCCTGAAGAGGGCCAATCATGGATT
GCTCGACCTTCCAAGGGACCCAGCATTCTTGGAAGTGTGCTTTCTCTCACATCTCGTCATGGCAGCATGGTGAACCAGAG
CGTCCCGCTTATGGATCCTATCGTCACGCTTTTCGGCAGTGTCCATGAGAACATGCCTCATGCTGGAGGAAGCATGAGGA
GTACATTGTTTCCCAACTTTGGTAGTATGTTTAGTGTGACGGATCAGCACCCCAAGGTTGATCAATGGGATGAGGAAAAC
CTTCATAGGGATGATGAGGAATACGCGTCTGATGGAGCTGGAGGTGACTATGAAGACAATGTCCACAGCCCGTTGCTGTC
CCGACAGACCACGAGCGCAGAAGGGAAGGACATTGCACACCATGGTCACCGTGGAAGTGCTCTGAGTATGAGAAGAAGAA
GCCTCTTGGAAGAGGGTGGCGAGGCGGTGAGCAGTACTGGCATTGGTGGGGGATGGCAGCTTGCATGGAAATGGTCAGAG
CGAGAAGGTGAGGATGGTAAGAAGGAAGGAGGATTTAAAAGGATCTACTTGCACCAAGAGGGAGTGCCAGGATCAAGAAG
GGGCTCGGTTATTTCACTTCCTGGTGGAGGGGATGCTCCTGAAGGCAGTGAATTCATACATGCTGCCGCTTTGGTAAGCC
AACCAGCACTTTACTCCAAGGATATCATTGAACAGCGTATGTCCGGTCCAGCCATGATTCATCCATCAGAGGCAGCTGCC
AAAGGTTCAAGCTTGAAAGATTTATTTGAACCTGGAGTGAGGCGTGCGCTGTTAGTTGGTGTTGGAATTCAAATCCTTCA
ACAGTTTGCTGGAATAAATGGAGTTCTCTACTACACCCCTCAAATACTTGAGCAAGCTGGTGTGGCAGTTCTCCTTTCCA
ATCTTGGCCTCAGTTCAGCATCAGCATCCATCTTGATCAGTTCTCTCACCACCTTACTGATGCTTCCTAGCATTGGTTTA
GCCATGAGACTTATGGACATTTCTGGAAGAAGGTTTCTGCTCCTGGGCACAATTCCAGTCTTGATAGCATCTCTAGTTGT
CTTGGTTGTGTCCAATGTTATTGACTTGGGTACAGTGCCCCATGCCGCGCTCTCCACAATCAGCGTCATCATCTACTTCT
GCTGCTTCGTCATGGGATTTGGTCCGATCCCCAACATTCTGTGTGCGGAGATCTTCCCCACTAGGGTCCGCGGCATATGC
ATTGCCATCTGCGCCCTGACATTCTGGATTGGTGATATCATTGTCACCTACAGCCTCCCTGTAATGCTGAACGCCATCGG
CCTAGCAGGTGTCTTCGGTATATACGCAGTTGTTTGTTCCATTGCCTTCGTGTTCGTCTTCCTCAAGGTCCCCGAGACAA
AGGGCATGCCGCTCGAAGTCATCACCGAGTTCTTCGCTGTTGGCGCAAAGCAAATGCAGGCTGCAAAGGCCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza rufipogon | ORUFI02G09610 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0229400 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opun_17 | 64.33 | 61.26 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OPUNC02G08590 retrocopies