Parental gene: | Sb01g046840 |
| Aliases: | None |
| Description: | None |
| Organism: | Sorghum (Sorghum bicolor) |
| Coordinates: | 1:69965202..69969884(+) |
>Sb01g046840
ATGGCGAGCCAAGGCGAGCCGTCTTCGTCGGATCCGAAGGGGAAGAAGGATTACTCGACGGCGATCCTCGAGAGGAAGAA
GTCGCCGAACCGGCTGGTGGTCGACGAGGCCACCAATGATGACAACTCCGTCGTCGCTCTGCACCCGGACACTATGGAGA
GGCTCCAGCTCTTCCGCGGTGACACTGTCCTGCTCAAGGGTAAGAAGAGAAAGGACACTATCTGCATCGTGCTTGCAGAT
GACACGTGTGAGGAGCCAAAGGTCCGAATGAATAAGGTTGTCAGGAAGAACTTGAGGGTACGGCTTGGTGATGTGGTATC
TGTCCATCAATGCCCAGATGTCAAATACGGGAAGCGCGTGCACATACTTCCAATTGATGACACCATTGAAGGCATCACTG
GCAACTTATTTGACGCCTTTCTAAAACCATACTTCCTTGAAGCCTATCGTCCTTTGAGGAAAGGAGACCTTTTCCTAGTC
AGAGGTGGCATGAGAAGTGTAGAATTCAAAGTCATAGAGACTGATCCTATAGAGTATTGTATCGTTGCACCAGATACAGA
AATATTCTGTGAGGGTGAGCCTGTTAAGAGGGAGGATGAGGAAAGACTTGATGAGGTTGGCTATGATGATGTTGGTGGAG
TTAGAAAGCAGATGGCCCAAATTAGAGAACTGGTTGAACTTCCACTGCGTCATCCCCAGCTTTTCAAGTCTATTGGTGTG
AAGCCACCAAAGGGCATATTGCTGTTTGGGCCTCCTGGATCTGGCAAGACCCTTATTGCTAGAGCTGTAGCTAATGAGAC
AGGTGCTTTCTTCTTTTTGATAAATGGGCCAGAAATCATGTCAAAACTAGCAGGAGAAAGTGAAAGTAATCTCAGAAAGG
CATTTGAAGAAGCTGAAAAAAATGCACCTTCCATCATTTTTATTGATGAGATAGATTCCATAGCTCCTAAGAGAGAAAAG
ACCCATGGAGAAGTTGAAAGGCGTATTGTTTCACAGCTCTTGACTCTTATGGATGGTCTGAAGTCTCGTGCACATGTTAT
TGTTATGGGTGCCACAAACCGTCCAAACAGTATCGATCCTGCTCTTAGAAGGTTTGGTAGGTTTGATCGTGAGATTGATA
TTGGTGTTCCAGATGAAGTTGGACGCCTTGAGGTTCTCCGGATTCACACCAAAAACATGAAGTTGGCTGAAAATGTTGAC
TTGGAGCTCATTGCGAAGGATACCCATGGTTATGTTGGTGCTGATCTTGCAGCCCTTTGTACCGAAGCTGCTCTTCAATG
CATCCGTGAGAAGATGGATATTATAGATCTTGAGGATGAGACCATAGATGCTGAGATATTGAACTCTATGGCTGTCACAA
ATGACCATTTCAAGACTGCACTTGGGACAAGCAACCCATCTGCTCTGCGTGAAACTGTTGTTGAAGTTCCAAATGTCTCT
TGGGAAGATATTGGTGGTCTGGAAAATGTTAAGAGGGAGCTACAGGAGACTGTTCAATATCCTGTAGAGCATCCCGAGAA
ATTTGAAAAGTTTGGCATGTCTCCTTCAAAGGGTGTTTTGTTTTATGGCCCTCCTGGCTGTGGCAAGACTTTGTTGGCCA
AGGCAATTGCTAATGAATGCCAGGCTAACTTCATTAGTGTGAAGGGTCCTGAACTGCTTACCATGTGGTTTGGTGAGAGC
GAGGCTAATGTCCGTGAGATTTTTGATAAGGCTAGGCAGTCTGCTCCATGTGTCCTCTTCTTCGATGAGCTTGATTCCAT
TGCTACTCAGAGAGGAAGCAGTGTTGGTGACGCAGGTGGTGCTGCTGATAGGGTGTTGAACCAGCTGCTTACTGAGATGG
ATGGCATGAATGCTAAGAAGACTGTTTTCATCATCGGTGCAACTAACAGACCAGATATCATTGACCCTGCCCTGCTGAGG
CCAGGGCGTCTGGATCAGCTTATCTACATTCCTCTACCTGATGAGCAATCCAGGCTCCAGATCTTCAAAGCCTGCCTCAG
GAAGTCTCCTGTGGCTAAGGATGTCGACTTGAATGCTCTTGCCAAATACACCCAGGGTTTCAGTGGTGCAGATATCACTG
AGATCTGCCAGCGTGCGTGCAAGTATGCTATCAGGGAGAACATCGAGAAGGATATCGAGAGGGAGCGGCGCAGGAAGGAC
AACCCTGAGGCTATGGAGGAAGACGAGGTAGACGACATTGCTGAGATCAAGGCTGCTCACTTCGAGGAGTCGATGAAGTT
CGCCCGACGCAGTGTTAGTGATGCCGACATCCGCAAGTACCAGGCCTTCGCCCAGACACTCCAGCAGTCCCGTGGGTTTG
GCAGCGAGTTCCGTTTCCCGGACCAACCGACGGCAGCTGCGGGATCTGCTGGTGCGGCCGATCCTTTTGCATCCGCTGCA
GCAGCAGCTGACGATGATGACTTGTATAATTA
ATGGCGAGCCAAGGCGAGCCGTCTTCGTCGGATCCGAAGGGGAAGAAGGATTACTCGACGGCGATCCTCGAGAGGAAGAA
GTCGCCGAACCGGCTGGTGGTCGACGAGGCCACCAATGATGACAACTCCGTCGTCGCTCTGCACCCGGACACTATGGAGA
GGCTCCAGCTCTTCCGCGGTGACACTGTCCTGCTCAAGGGTAAGAAGAGAAAGGACACTATCTGCATCGTGCTTGCAGAT
GACACGTGTGAGGAGCCAAAGGTCCGAATGAATAAGGTTGTCAGGAAGAACTTGAGGGTACGGCTTGGTGATGTGGTATC
TGTCCATCAATGCCCAGATGTCAAATACGGGAAGCGCGTGCACATACTTCCAATTGATGACACCATTGAAGGCATCACTG
GCAACTTATTTGACGCCTTTCTAAAACCATACTTCCTTGAAGCCTATCGTCCTTTGAGGAAAGGAGACCTTTTCCTAGTC
AGAGGTGGCATGAGAAGTGTAGAATTCAAAGTCATAGAGACTGATCCTATAGAGTATTGTATCGTTGCACCAGATACAGA
AATATTCTGTGAGGGTGAGCCTGTTAAGAGGGAGGATGAGGAAAGACTTGATGAGGTTGGCTATGATGATGTTGGTGGAG
TTAGAAAGCAGATGGCCCAAATTAGAGAACTGGTTGAACTTCCACTGCGTCATCCCCAGCTTTTCAAGTCTATTGGTGTG
AAGCCACCAAAGGGCATATTGCTGTTTGGGCCTCCTGGATCTGGCAAGACCCTTATTGCTAGAGCTGTAGCTAATGAGAC
AGGTGCTTTCTTCTTTTTGATAAATGGGCCAGAAATCATGTCAAAACTAGCAGGAGAAAGTGAAAGTAATCTCAGAAAGG
CATTTGAAGAAGCTGAAAAAAATGCACCTTCCATCATTTTTATTGATGAGATAGATTCCATAGCTCCTAAGAGAGAAAAG
ACCCATGGAGAAGTTGAAAGGCGTATTGTTTCACAGCTCTTGACTCTTATGGATGGTCTGAAGTCTCGTGCACATGTTAT
TGTTATGGGTGCCACAAACCGTCCAAACAGTATCGATCCTGCTCTTAGAAGGTTTGGTAGGTTTGATCGTGAGATTGATA
TTGGTGTTCCAGATGAAGTTGGACGCCTTGAGGTTCTCCGGATTCACACCAAAAACATGAAGTTGGCTGAAAATGTTGAC
TTGGAGCTCATTGCGAAGGATACCCATGGTTATGTTGGTGCTGATCTTGCAGCCCTTTGTACCGAAGCTGCTCTTCAATG
CATCCGTGAGAAGATGGATATTATAGATCTTGAGGATGAGACCATAGATGCTGAGATATTGAACTCTATGGCTGTCACAA
ATGACCATTTCAAGACTGCACTTGGGACAAGCAACCCATCTGCTCTGCGTGAAACTGTTGTTGAAGTTCCAAATGTCTCT
TGGGAAGATATTGGTGGTCTGGAAAATGTTAAGAGGGAGCTACAGGAGACTGTTCAATATCCTGTAGAGCATCCCGAGAA
ATTTGAAAAGTTTGGCATGTCTCCTTCAAAGGGTGTTTTGTTTTATGGCCCTCCTGGCTGTGGCAAGACTTTGTTGGCCA
AGGCAATTGCTAATGAATGCCAGGCTAACTTCATTAGTGTGAAGGGTCCTGAACTGCTTACCATGTGGTTTGGTGAGAGC
GAGGCTAATGTCCGTGAGATTTTTGATAAGGCTAGGCAGTCTGCTCCATGTGTCCTCTTCTTCGATGAGCTTGATTCCAT
TGCTACTCAGAGAGGAAGCAGTGTTGGTGACGCAGGTGGTGCTGCTGATAGGGTGTTGAACCAGCTGCTTACTGAGATGG
ATGGCATGAATGCTAAGAAGACTGTTTTCATCATCGGTGCAACTAACAGACCAGATATCATTGACCCTGCCCTGCTGAGG
CCAGGGCGTCTGGATCAGCTTATCTACATTCCTCTACCTGATGAGCAATCCAGGCTCCAGATCTTCAAAGCCTGCCTCAG
GAAGTCTCCTGTGGCTAAGGATGTCGACTTGAATGCTCTTGCCAAATACACCCAGGGTTTCAGTGGTGCAGATATCACTG
AGATCTGCCAGCGTGCGTGCAAGTATGCTATCAGGGAGAACATCGAGAAGGATATCGAGAGGGAGCGGCGCAGGAAGGAC
AACCCTGAGGCTATGGAGGAAGACGAGGTAGACGACATTGCTGAGATCAAGGCTGCTCACTTCGAGGAGTCGATGAAGTT
CGCCCGACGCAGTGTTAGTGATGCCGACATCCGCAAGTACCAGGCCTTCGCCCAGACACTCCAGCAGTCCCGTGGGTTTG
GCAGCGAGTTCCGTTTCCCGGACCAACCGACGGCAGCTGCGGGATCTGCTGGTGCGGCCGATCCTTTTGCATCCGCTGCA
GCAGCAGCTGACGATGATGACTTGTATAATTA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Zea mays | GRMZM2G063060 | ortholog_one2one | 1 retrogene | |
| Leersia perrieri | LPERR03G03650 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA06G0255900 | ortholog_one2many | 1 retrogene | |
| Populus trichocarpa | POPTR_0006s12740 | ortholog_many2many | 1 retrogene | |
| Sorghum bicolor | Sb01g020910 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sbic_42 | 71.59 | 87.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Sb01g046840 retrocopies