Parental gene: | Sb01g020910 |
| Aliases: | None |
| Description: | None |
| Organism: | Sorghum (Sorghum bicolor) |
| Coordinates: | 1:23937887..23942926(-) |
>Sb01g020910
ATGGCGAGCCAAGGGGAGCCCTCGGCCTCTGCTTCTGATCCGAAGGAGAAGAAGGATTACTCGACGGCGATCCTGGAGAG
GAAAAAGTCTCCGAATCGCCTTGTGGTCGATGAGGCCACCAACGACGATAACTCCGTCGTCGCGCTGCACCCTGACACCA
TGGAGAGGCTGCAGCTCTTCCGCGGCGACACCGTCCTCCTCAAGGGTAAGAAGAGGAAAGACACTATTTGCATTGTCCTT
GCGGATGAAACCTGTGAGGAGCCTAAGGTTCGGATGAACAAGGTTGTCCGCCAGAACCTGAGGGTGAGGCTTGGTGATGT
GGTTTCTGTCCACCAGTGCCAGGATGTGAAATACGGGAAGCGTGTGCACATTCTTCCAATTGATGATACAGTTGAAGGCA
TTACCGGGAACTTGTTTGATGCCTTCTTGAAACCATACTTCCTAGAAGCCTACAGACCTTTGAGGAAAGGAGACCTTTTC
CTTGTCAGGGGTGGAATGAGAAGTGTGGAATTCAAAGTTATAGAGACTGATCCTGCTGAATATTGTATCGTTGCGCCAGA
TACTGAAATATTCTGTGATGGGGAGCCTATTAAGAGGGAGGATGAGGAGCGTCTTGATGAAGTTGGTTATGATGATGTTG
GTGGAGTTAGAAAGCAAATGGCCCAAATCAGAGAGCTTGTTGAGCTTCCACTACGCCATCCCCAGCTTTTCAAATCTATT
GGTGTAAAGCCACCAAAGGGCATATTGCTGTATGGACCACCTGGTTCTGGAAAGACTCTTATTGCTCGTGCTGTTGCAAA
TGAGACTGGAGCCTTTTTCTTTCTGATCAATGGCCCAGAGATTATGTCGAAACTAGCAGGAGAGAGTGAGAGTAATCTCA
GAAAGGCTTTTGAAGAAGCAGAAAAGAATGCTCCATCTATCATTTTCATTGATGAAATTGATTCCATTGCACCCAAGAGA
GAGAAGACCAATGGAGAAGTAGAGCGTCGTATTGTTTCACAGCTATTGACTCTTATGGATGGACTAAAATCTCGTTCCCA
TGTTATTGTTATGGGTGCTACAAACAGACCAAACAGCATTGATCCGGCTCTTCGAAGATTTGGAAGGTTTGACCGGGAAA
TTGACATTGGAGTTCCTGATGAAGTTGGCCGGCTTGAGGTTCTCCGCATTCACACTAAGAACATGAAACTAGCTGAAGAT
GTTAATTTGGAACTCATTTCAAAGGATACCCATGGATATGTTGGTGCTGATCTTGCTGCGCTTTGCACTGAGGCTGCTCT
CCAGTGCATTCGTGAGAAGATGGACATTATAGATCTTGAGGATGAGACAATAGATGCAGAGATATTGAACTCGATGGCTG
TTACAAATGACCACTTCAAGACCGCGCTTGGAACAAGCAACCCATCTGCTCTACGTGAAACTGTTGTCGAAGTCCCAAAT
GTCTCTTGGGAGGATATTGGTGGGCTGGAGAATGTCAAGAGGGAGCTCCAGGAGACTGTTCAATATCCTGTGGAGCATCC
AGAGAAGTTCGAGAAGTTTGGCATGTCTCCATCGAAAGGAGTTTTGTTCTATGGTCCTCCTGGTTGCGGTAAGACCTTGT
TGGCAAAGGCAATTGCCAATGAGTGCCAGGCTAACTTCATCAGTGTCAAGGGTCCTGAGTTGCTTACCATGTGGTTTGGT
GAGAGTGAAGCCAACGTCCGTGAAATTTTCGACAAGGCTCGCCAATCTGCTCCTTGTGTCCTCTTCTTTGATGAGCTTGA
CTCGATTGCTACTCAGAGAGGAAGCAGTGTGGGTGATGCTGGAGGTGCGGCTGATAGAGTGCTTAATCAGCTACTGACAG
AGATGGATGGCATGAATGCCAAGAAAACTGTGTTTATTATTGGGGCTACAAACAGGCCTGACATCATTGACCCTGCTCTG
CTGAGGCCAGGACGTCTTGACCAGCTGATCTACATTCCACTGCCTGATGAGCAGTCTAGGCTCCAGATCTTCAAGGCTTG
CCTTAGGAAGTCCCCTGTGGCGAAGGACGTGGACTTGAATGCTCTTGCTAAGTACACGCAAGGGTTCAGTGGAGCAGATA
TCACAGAAATTTGCCAGCGTGCCTGCAAGTATGCAATCAGAGAGAATATTGAGAAGGACATTGAGAGGGAAAGGCGGAGA
AAGGACAACCCTGAGGCGATGGAGGAAGACGAAGTGGACGAGATTGCTGAGATCAAGGCGGCTCACTTTGAAGAGTCGAT
GAAGTACGCTCGGCGTAGTGTCAGTGATGCTGATATTCGCAAGTACCAGGCGTTTGCCCAGACATTGCAGCAGTCCCGTG
GGTTCGGCAGTGAGTTCCGCTTCTCGGAGCAATCGGCGACAGCTGGTGCTGCTGCAGCTGATCCGTTTGCCTCTGCTGGT
GCTGCGGCTGATGATGACGATCTATACAGCTA
ATGGCGAGCCAAGGGGAGCCCTCGGCCTCTGCTTCTGATCCGAAGGAGAAGAAGGATTACTCGACGGCGATCCTGGAGAG
GAAAAAGTCTCCGAATCGCCTTGTGGTCGATGAGGCCACCAACGACGATAACTCCGTCGTCGCGCTGCACCCTGACACCA
TGGAGAGGCTGCAGCTCTTCCGCGGCGACACCGTCCTCCTCAAGGGTAAGAAGAGGAAAGACACTATTTGCATTGTCCTT
GCGGATGAAACCTGTGAGGAGCCTAAGGTTCGGATGAACAAGGTTGTCCGCCAGAACCTGAGGGTGAGGCTTGGTGATGT
GGTTTCTGTCCACCAGTGCCAGGATGTGAAATACGGGAAGCGTGTGCACATTCTTCCAATTGATGATACAGTTGAAGGCA
TTACCGGGAACTTGTTTGATGCCTTCTTGAAACCATACTTCCTAGAAGCCTACAGACCTTTGAGGAAAGGAGACCTTTTC
CTTGTCAGGGGTGGAATGAGAAGTGTGGAATTCAAAGTTATAGAGACTGATCCTGCTGAATATTGTATCGTTGCGCCAGA
TACTGAAATATTCTGTGATGGGGAGCCTATTAAGAGGGAGGATGAGGAGCGTCTTGATGAAGTTGGTTATGATGATGTTG
GTGGAGTTAGAAAGCAAATGGCCCAAATCAGAGAGCTTGTTGAGCTTCCACTACGCCATCCCCAGCTTTTCAAATCTATT
GGTGTAAAGCCACCAAAGGGCATATTGCTGTATGGACCACCTGGTTCTGGAAAGACTCTTATTGCTCGTGCTGTTGCAAA
TGAGACTGGAGCCTTTTTCTTTCTGATCAATGGCCCAGAGATTATGTCGAAACTAGCAGGAGAGAGTGAGAGTAATCTCA
GAAAGGCTTTTGAAGAAGCAGAAAAGAATGCTCCATCTATCATTTTCATTGATGAAATTGATTCCATTGCACCCAAGAGA
GAGAAGACCAATGGAGAAGTAGAGCGTCGTATTGTTTCACAGCTATTGACTCTTATGGATGGACTAAAATCTCGTTCCCA
TGTTATTGTTATGGGTGCTACAAACAGACCAAACAGCATTGATCCGGCTCTTCGAAGATTTGGAAGGTTTGACCGGGAAA
TTGACATTGGAGTTCCTGATGAAGTTGGCCGGCTTGAGGTTCTCCGCATTCACACTAAGAACATGAAACTAGCTGAAGAT
GTTAATTTGGAACTCATTTCAAAGGATACCCATGGATATGTTGGTGCTGATCTTGCTGCGCTTTGCACTGAGGCTGCTCT
CCAGTGCATTCGTGAGAAGATGGACATTATAGATCTTGAGGATGAGACAATAGATGCAGAGATATTGAACTCGATGGCTG
TTACAAATGACCACTTCAAGACCGCGCTTGGAACAAGCAACCCATCTGCTCTACGTGAAACTGTTGTCGAAGTCCCAAAT
GTCTCTTGGGAGGATATTGGTGGGCTGGAGAATGTCAAGAGGGAGCTCCAGGAGACTGTTCAATATCCTGTGGAGCATCC
AGAGAAGTTCGAGAAGTTTGGCATGTCTCCATCGAAAGGAGTTTTGTTCTATGGTCCTCCTGGTTGCGGTAAGACCTTGT
TGGCAAAGGCAATTGCCAATGAGTGCCAGGCTAACTTCATCAGTGTCAAGGGTCCTGAGTTGCTTACCATGTGGTTTGGT
GAGAGTGAAGCCAACGTCCGTGAAATTTTCGACAAGGCTCGCCAATCTGCTCCTTGTGTCCTCTTCTTTGATGAGCTTGA
CTCGATTGCTACTCAGAGAGGAAGCAGTGTGGGTGATGCTGGAGGTGCGGCTGATAGAGTGCTTAATCAGCTACTGACAG
AGATGGATGGCATGAATGCCAAGAAAACTGTGTTTATTATTGGGGCTACAAACAGGCCTGACATCATTGACCCTGCTCTG
CTGAGGCCAGGACGTCTTGACCAGCTGATCTACATTCCACTGCCTGATGAGCAGTCTAGGCTCCAGATCTTCAAGGCTTG
CCTTAGGAAGTCCCCTGTGGCGAAGGACGTGGACTTGAATGCTCTTGCTAAGTACACGCAAGGGTTCAGTGGAGCAGATA
TCACAGAAATTTGCCAGCGTGCCTGCAAGTATGCAATCAGAGAGAATATTGAGAAGGACATTGAGAGGGAAAGGCGGAGA
AAGGACAACCCTGAGGCGATGGAGGAAGACGAAGTGGACGAGATTGCTGAGATCAAGGCGGCTCACTTTGAAGAGTCGAT
GAAGTACGCTCGGCGTAGTGTCAGTGATGCTGATATTCGCAAGTACCAGGCGTTTGCCCAGACATTGCAGCAGTCCCGTG
GGTTCGGCAGTGAGTTCCGCTTCTCGGAGCAATCGGCGACAGCTGGTGCTGCTGCAGCTGATCCGTTTGCCTCTGCTGGT
GCTGCGGCTGATGATGACGATCTATACAGCTA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brachypodium distachyon | BRADI1G74922 | ortholog_one2many | 1 retrogene | |
| Hordeum vulgare | MLOC_74069 | ortholog_one2many | 2 retrogenes | |
| Hordeum vulgare | MLOC_76416 | ortholog_one2many | 1 retrogene | |
| Populus trichocarpa | POPTR_0006s12740 | ortholog_many2many | 1 retrogene | |
| Sorghum bicolor | Sb01g046840 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sbic_10 | 84.95 | 94.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Sb01g020910 retrocopies