Parental gene:

Solyc05g052790.2

Aliases:None
Description:None
Organism:Tomato (Solanum lycopersicum)
Coordinates:5:62976214..62980340(-)


>Solyc05g052790.2
ATGTCGGCAATGAAGAGTTCAGGTCAATTCTTTACAATTGGGCTAGTAACAGCTTGGTATTCATCAAACATTGGGGTTTT
GTTACTGAACAAGTATTTGTTAAGCAATTATGGGTTTAAATACCCAATTTTTCTTACTATGTGTCATATGACTGCTTGTT
CTTTACTGAGTTATATAGCTATTGCTTGGATGAAAATGGTACCAATGCAGACTATAAGATCTAGGGTTCAGTTTATGAAG
ATCTCTGCTTTGAGTCTTATTTTTTGTACATCTGTTGTTAGTGGCAATATCTCACTTAGGTATTTGCCAGTATCTTTTAA
TCAGGCTATAGGTGCTACTACACCTTTCTTTACTGCTGTATTTGCTTACTTGATGACATTCAAGAGGGAGGCATGGTTGA
CTTATGTCACTCTAATTCCTGTTGTCACCGGGGTTATCATCGCCAGTGGGGGTGAACCAAGTTTTCATCTATTTGGATTC
ATAATTTGTATCGGTGCAACAGCTGCAAGAGCACTCAAGTCAGTGCTTCAGGGGATTTTGCTATCTTCTGAAGGGGAGAA
GCTGAATTCCATGAACCTTCTTCTCTATATGGCTCCCATAGCAGTTGTATTTCTATTACCGGCAACACTTGTGATGGAAG
AAAATGTAGTTGGCATCACACTGGCACTTGCAAGAGATGATAGTAGAATCATCTGGCTTTTGCTATTCAATTCTGCGCTG
GCATATTTTGTAAATCTGACCAACTTTCTGGTGACAAAACACACCAGTGCCCTGACTCTTCAGGTCCTGGGAAACGCAAA
AGGAGCTGTAGCTGTAGTCATCTCAATCTTAATATTTAGAAACCCGGTGTCAGTTACAGGGATGCTTGGCTATGCACTTA
CAGTTTTTGGAGTCATACTCTATAGTGAAGCGAAGAAACGTAGTAAATGA

Species Parental gene accession Homology type Retrogenes number
Amborella trichopoda AMTR_s00080p00074790 ortholog_one2one 1 retrogene
retro_atri_6,
Medicago truncatula MTR_3g070000 ortholog_one2one 1 retrogene
retro_mtru_1,
Solanum tuberosum PGSC0003DMG401027186 ortholog_one2one 1 retrogene
retro_stub_37,
Prunus persica PRUPE_ppa009115mg ortholog_one2one 1 retrogene
retro_pper_41,
Theobroma cacao TCM_042615 ortholog_one2one 1 retrogene
retro_tcac_6,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_slyc_35 64.69 98.06
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Download FASTA sequences of all Solyc05g052790.2 retrocopies