Parental gene: | PRUPE_ppa009115mg |
| Aliases: | None |
| Description: | None |
| Organism: | Peach (Prunus persica) |
| Coordinates: | scaffold_2:22674503..22677365(+) |
>PRUPE_ppa009115mg
ATGAAGGGCAAGAGCCGTTTGTTCACGATCGGGCTTGTCACCGCCTGGTACTCATCCAACATTGGGGTTCTGCTGCTGAA
CAAGTACTTACTCAGCAACTATGGCTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACCGCCTGTTCTTTGCTCA
GCTACATAGCAATTGCTTGGATGAAGATGGTTCCTATGCAAACCATTCGATCCCGGGTCCAATTCTTGAAGATCACGGCG
CTGAGCCTTGTGTTTTGTGTGTCGGTCGTTTTTGGGAACATTTCGCTTCGGTATTTGCCGGTCTCGTTTAACCAGGCTAT
TGGGGCCACCACGCCTTTCTTCACTGCGGTCTTCGCCTACTTTATGACTCTCAAAAGGGAAGCTTGGCTCACCTATCTCA
CCCTCGTTCCTGTTGTTACAGGGGTCATCATTGCAAGTGGGGGTGAACCAAGCTTCCATCTGTTTGGTTTCTTAATTTGT
GTCGCAGCAACTGCTGCAAGGGCACTTAAATCAGTGCTTCAAGGGATTTTGCTTTCTTCCGAAGGGGAGAAGCTGAATTC
CATGAACCTCCTTCTATATATGGCTCCGATAGCTGTTGTTTTCCTACTTCCTGCAACACTTATCATGGAAGAAAATGTGG
TTGGTATAACACTAGCTCTTGCAAGAGATGATGTCAAGATCATATGGTATCTACTATTCAATTCAGCATTGGCATATTTT
GTAAATCTGACCAACTTCTTGGTCACAAAACACACCAGTGCTCTGACTCTTCAGGTACTAGGAAATGCTAAAGGAGCTGT
AGCTGTGGTGGTCTCAATATTAATTTTTAGAAACCCTGTTTCCGTGACTGGAATGATGGGTTATTCTCTCACAGTCTTTG
GAGTGATCCTTTACAGTGAAGCCAAGAAACGAAGTAAATGA
ATGAAGGGCAAGAGCCGTTTGTTCACGATCGGGCTTGTCACCGCCTGGTACTCATCCAACATTGGGGTTCTGCTGCTGAA
CAAGTACTTACTCAGCAACTATGGCTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACCGCCTGTTCTTTGCTCA
GCTACATAGCAATTGCTTGGATGAAGATGGTTCCTATGCAAACCATTCGATCCCGGGTCCAATTCTTGAAGATCACGGCG
CTGAGCCTTGTGTTTTGTGTGTCGGTCGTTTTTGGGAACATTTCGCTTCGGTATTTGCCGGTCTCGTTTAACCAGGCTAT
TGGGGCCACCACGCCTTTCTTCACTGCGGTCTTCGCCTACTTTATGACTCTCAAAAGGGAAGCTTGGCTCACCTATCTCA
CCCTCGTTCCTGTTGTTACAGGGGTCATCATTGCAAGTGGGGGTGAACCAAGCTTCCATCTGTTTGGTTTCTTAATTTGT
GTCGCAGCAACTGCTGCAAGGGCACTTAAATCAGTGCTTCAAGGGATTTTGCTTTCTTCCGAAGGGGAGAAGCTGAATTC
CATGAACCTCCTTCTATATATGGCTCCGATAGCTGTTGTTTTCCTACTTCCTGCAACACTTATCATGGAAGAAAATGTGG
TTGGTATAACACTAGCTCTTGCAAGAGATGATGTCAAGATCATATGGTATCTACTATTCAATTCAGCATTGGCATATTTT
GTAAATCTGACCAACTTCTTGGTCACAAAACACACCAGTGCTCTGACTCTTCAGGTACTAGGAAATGCTAAAGGAGCTGT
AGCTGTGGTGGTCTCAATATTAATTTTTAGAAACCCTGTTTCCGTGACTGGAATGATGGGTTATTCTCTCACAGTCTTTG
GAGTGATCCTTTACAGTGAAGCCAAGAAACGAAGTAAATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Amborella trichopoda | AMTR_s00080p00074790 | ortholog_one2many | 1 retrogene | |
| Medicago truncatula | MTR_3g070000 | ortholog_one2one | 1 retrogene | |
| Solanum tuberosum | PGSC0003DMG401027186 | ortholog_one2one | 1 retrogene | |
| Solanum lycopersicum | Solyc05g052790.2 | ortholog_one2one | 1 retrogene | |
| Theobroma cacao | TCM_042615 | ortholog_one2one | 1 retrogene | |
| Vitis vinifera | VIT_13s0019g03270 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pper_41 | 67.33 | 98.04 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all PRUPE_ppa009115mg retrocopies