RetrogeneDB ID: | retro_chof_1418 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_286994:252..594(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSCHOG00000004234 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000008485 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.58 % |
Parental protein coverage: | 53.02 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSMQGQITDSNISEILHPQVQTLDLRSCDISDAALLHLRNCRKLKKLNLNSSKENRMSITSEGIKAVASS |
.SMQGQITDSNI.EILHP..QTLDL.SCDISDAALLHL.N.RKLKKLN.NSS.ENRMS.TSEGIK.VASS | |
Retrocopy | ISMQGQITDSNINEILHPHIQTLDLQSCDISDAALLHLHNYRKLKKLNFNSSEENRMSVTSEGIKVVASS |
Parental | CLYLHEASLKRCCNLTDEGVLALALNCRLLKIIDLGGCLGITDV |
C.YL.E.SLKRCC.LTDEGVLAL..NC.LLKIIDLGGCL.I.D. | |
Retrocopy | CSYLPETSLKRCCSLTDEGVLALTFNCWLLKIIDLGGCLNIMDL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000014156 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000010668 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000008485 | 2 retrocopies |
retro_chof_1418 , retro_chof_1459,
|