RetrogeneDB ID: | retro_chof_1862 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_406952:58..361(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2H | ||
Ensembl ID: | ENSCHOG00000003605 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2H [Source:HGNC Symbol;Acc:12484] |
Percent Identity: | 98.02 % |
Parental protein coverage: | 55.19 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEE |
SGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEE | |
Retrocopy | SGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEE |
Parental | ALKEQEEGTGDSSSESSMSDFSEDEAQDMEL |
A.KEQEEGTGDS.SESSMSDFSEDEAQDMEL | |
Retrocopy | APKEQEEGTGDSLSESSMSDFSEDEAQDMEL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000003605 | 2 retrocopies |
retro_chof_1862 , retro_chof_1932,
|
Callithrix jacchus | ENSCJAG00000010520 | 1 retrocopy | |
Homo sapiens | ENSG00000186591 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000012685 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000017997 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000048205 | 2 retrocopies |