RetrogeneDB ID: | retro_chof_2448 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_76493:6764..7020(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000004496 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.77 % |
Parental protein coverage: | 79.44 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KSTNLLIRRRPFSLLVREICTIFSRGVDLNWQAQALLALQEAAETFLVHLFEDAY-LLSLHAGRVTLFPK |
KST.LLIR..PFSLLVREIC..FSR..D.N.Q.QALLALQEA.ETFLV.L..D.Y.LLS.HAG.V.L..K | |
Retrocopy | KSTHLLIRKLPFSLLVREICVKFSRVMDFN*QTQALLALQEAGETFLVRLCDDIY>LLSAHAGCVILVRK |
Parental | DVQLARRIRGIEQGLG |
DVQLAR.I.G...GLG | |
Retrocopy | DVQLARKIQGVQEGLG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000023938 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000004496 | 3 retrocopies |
retro_chof_2096, retro_chof_2448 , retro_chof_4,
|
Ornithorhynchus anatinus | ENSOANG00000000516 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000024154 | 2 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000025168 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000010334 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000010278 | 2 retrocopies |