RetrogeneDB ID: | retro_chof_4 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_97785:3800..4124(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSCHOG00000005620 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000004496 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 97.2 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | PSPRRRRHRRGYQTLREIRKLQKSTNLLIRRRPFSLLVREICTIFSRGVDLNWQAQALLALQEAAETFLV |
PSP.RRRHRRGYQTLREIRKLQKSTNLLIRRRPFSLLVREICTIFS.GVDLNWQAQALLALQEAAETFLV | |
Retrocopy | PSPGRRRHRRGYQTLREIRKLQKSTNLLIRRRPFSLLVREICTIFSHGVDLNWQAQALLALQEAAETFLV |
Parental | HLFEDAYLLSLHAGRVTLFPKDVQLARRIRGIEQGLG |
H.FEDAYLLSLHAGRVTLFPKDVQLARRIRGIEQGLG | |
Retrocopy | HPFEDAYLLSLHAGRVTLFPKDVQLARRIRGIEQGLG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000023938 | 1 retrocopy | |
Choloepus hoffmanni | ENSCHOG00000004496 | 3 retrocopies |
retro_chof_2096, retro_chof_2448, retro_chof_4 ,
|
Ornithorhynchus anatinus | ENSOANG00000000516 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000024154 | 2 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000025168 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000010334 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000010278 | 2 retrocopies |