RetrogeneDB ID: | retro_etel_1881 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_310953:804..1233(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | STYX | ||
Ensembl ID: | ENSETEG00000000561 | ||
Aliases: | None | ||
Description: | serine/threonine/tyrosine interacting protein [Source:HGNC Symbol;Acc:11447] |
Percent Identity: | 98.6 % |
Parental protein coverage: | 64.13 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MEDVKLEFPSLPQCKDDAEEWTYPMRREMQEILPGLFLGPYSSAMKSKLSILQKHGITHIICIRQNIDAN |
MEDVKLEFPSLPQCKDDAEEWTYPMRREMQEILPGLFLGPYSSAMKSKL.ILQKHGITHIICIRQNI.AN | |
Retrocopy | MEDVKLEFPSLPQCKDDAEEWTYPMRREMQEILPGLFLGPYSSAMKSKLPILQKHGITHIICIRQNIEAN |
Parental | FIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQTGGKVLVHGNAGISRSAAFVIAYIMETFG |
FIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQTGGKVLVHGNAGISRSAAFVIAYIMETFG | |
Retrocopy | FIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQTGGKVLVHGNAGISRSAAFVIAYIMETFG |
Parental | MKY |
MKY | |
Retrocopy | MKY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000016631 | 9 retrocopies | |
Echinops telfairi | ENSETEG00000000561 | 1 retrocopy |
retro_etel_1881 ,
|
Echinops telfairi | ENSETEG00000011289 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000029372 | 1 retrocopy | |
Mus musculus | ENSMUSG00000053205 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000016123 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000007956 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000014504 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000012229 | 1 retrocopy |