RetrogeneDB ID: | retro_etel_393 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6698:178218..178540(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MYL12A | ||
Ensembl ID: | ENSETEG00000011271 | ||
Aliases: | None | ||
Description: | myosin, light chain 12A, regulatory, non-sarcomeric [Source:HGNC Symbol;Acc:16701] |
Percent Identity: | 57.66 % |
Parental protein coverage: | 62.79 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | QNRDGFIDKEDLHDMLASLGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDV-IRNAF-ACF |
.N.DGF........M...L.............NEAPGPI.F..F..MFGEKL..TDPEDV..RN.F.A.F | |
Retrocopy | KN*DGFMTRKC---MISRLLWGRIQPHISQRLNEAPGPIHFPTFRLMFGEKLPRTDPEDVGRRNRF>ASF |
Parental | DEEATGTIQEDYLRELL-TTMGDRFTDEEVDELYREAPIDK |
DEEA.GTIQED.L.ELL.TTMGDRFTDE.V..LYRE.P.DK | |
Retrocopy | DEEAPGTIQEDDLSELLTTTMGDRFTDEQVELLYREVPMDK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |