RetrogeneDB ID: | retro_lafr_938 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_5:51160967..51161237(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CUTA | ||
Ensembl ID: | ENSLAFG00000005876 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.44 % |
Parental protein coverage: | 50.85 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | SPPSQPSPAPGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEV |
S..SQ..PA..SG.VP..VS.AFVTC..EK...EIARAV.EK.L.AC..LIPQ.TSI.EWK..I.EDSEV | |
Retrocopy | SSVSQTLPASVSGCVPSLVSGAFVTCYKEKATNEIARAVMEKHLVACISLIPQVTSICEWKWTIQEDSEV |
Parental | LMMIKTQSSLVPALTDFVRS |
.MMI..QSSLV...T.FVRS | |
Retrocopy | PMMINAQSSLVSYMT*FVRS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Loxodonta africana | ENSLAFG00000005876 | 1 retrocopy |
retro_lafr_938 ,
|
Otolemur garnettii | ENSOGAG00000015556 | 1 retrocopy |