RetrogeneDB ID: | retro_ogar_2719 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873653.1:3345947..3346455(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000015556 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.08 % |
Parental protein coverage: | 93.26 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | CSQAALLLSVLWMPALPP-VASRLLLVPRALLSMASGS----PPSQSSPP-SGSSYVPGSVSAAFITCPN |
CS...LLLSVLW..ALP..VASRLLLVP.ALLSMASGS....PP...S.P.SGSSYVPGSVS.AFITCP. | |
Retrocopy | CSAQSLLLSVLWILALPQ<VASRLLLVP*ALLSMASGSLPPPPPPSQSSPPSGSSYVPGSVSSAFITCPK |
Parental | EKVAKEIARAVVEKRLAACINLIPQVTSIYEWKGKIEEDSEVLMMVKTQSSLVPALTDFVRSVHPYEVAE |
.KVAKEIARAVV.K.LAACINLIPQVTSIYE.KGK.EEDSEVLMMVK.QSSLVPALTDFV.SVHPYE.AE | |
Retrocopy | KKVAKEIARAVV-KCLAACINLIPQVTSIYE*KGKTEEDSEVLMMVKIQSSLVPALTDFVCSVHPYEMAE |
Parental | VIALPVEQGNYPYLHWVRQVTESV-SDSSPVLP |
VIALPVEQGNYP.LH.VRQVTESV.SDSS.VLP | |
Retrocopy | VIALPVEQGNYPHLHCVRQVTESV<SDSSIVLP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000009616 | 1 retrocopy | |
Loxodonta africana | ENSLAFG00000005876 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000015556 | 1 retrocopy |
retro_ogar_2719 ,
|
Ictidomys tridecemlineatus | ENSSTOG00000002474 | 1 retrocopy |